Mastomys coucha (southern multimammate mouse): 116072138
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Entry
116072138 CDS
T07224
Symbol
Mmp13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04657
IL-17 signaling pathway
mcoc04926
Relaxin signaling pathway
mcoc04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
116072138 (Mmp13)
09152 Endocrine system
04926 Relaxin signaling pathway
116072138 (Mmp13)
04928 Parathyroid hormone synthesis, secretion and action
116072138 (Mmp13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116072138 (Mmp13)
Peptidases and inhibitors [BR:
mcoc01002
]
Metallo peptidases
Family M10
116072138 (Mmp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Metallopep
Motif
Other DBs
NCBI-GeneID:
116072138
NCBI-ProteinID:
XP_031199289
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MHSAILATFFLLSWTHCWSLPLPYGDDDDDDLSEEDFVFAEHYLKSYYHPVTLAGILKKS
TVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDVGEYNVFPRTLKWSQTNLT
YRIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPNYGGDAHFDDDEYWTSSSKGYNLFIVAAHELGHSLGLDHSKDPGAL
MFPIYTYTSKSHFTLPDDDVQGIQSLYGPGDEDPNPKHPKTPEKCDPALSLDAITSLRGE
TMIFKDRFFWRLHPQQVEAELFLTKSFWPELPNHVDAAYEHPSRDLMFIFRGRKFWALSG
YDILEGYPRKISDLGFPKEVKRLSAAVHFEDTGKTLFFSGNHVWSYDDANQTMDKDYPRR
IEEEFPGIGNKVDAVYEKNGYLYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagctatcctggccaccttcttcttgttgagctggactcactgttggtccctg
cctcttccctatggtgatgatgatgatgatgacttgtctgaggaagactttgtgtttgca
gagcactacttgaaatcatactaccatcctgtgactctcgcgggaatcctgaagaagtct
acagtgacctccacagttgataggctccgagaaatgcagtctttctttggcttagaagtg
actggcaaacttgatgatcccaccctagacatcatgagaaaaccaagatgtggagtgcct
gatgtgggtgaatacaatgttttccctcgaacactcaaatggtcccaaacgaacttaact
tacagaattgtgaactatactcctgatatgtcccattctgaagtggagaaagccttcaga
aaagccttcaaggtctggtctgatgtgacacctctgaatttcaccagaatctatgatggc
actgctgatatcatgatatcttttggaacgaaagaacatggtgacttctacccatttgac
ggaccttctggtcttctggcacatgcttttcctcctggaccaaactatggtggagatgcc
cattttgatgatgatgaatactggacaagcagttccaaaggctacaacttgtttattgtt
gctgcccatgagcttggccactccctaggtctggaccactccaaggacccaggagctctg
atgtttcccatctatacctacaccagcaaaagccatttcacgcttcctgatgatgatgtt
caaggaatccagtctctctatggtccaggagatgaagaccccaaccctaaacatcccaaa
acaccagagaagtgtgacccagccctatcccttgatgccattaccagtctccgaggagaa
actatgatctttaaagacagattcttctggcgcctccaccctcagcaggtcgaggctgag
ctgtttttgacaaaatccttttggccagaacttcccaaccatgtggatgctgcgtatgaa
catccatcccgtgaccttatgtttatttttagagggagaaaattttgggctctgagtggt
tatgacattctggaaggttatcccagaaaaatatctgacctggggtttccaaaagaggtg
aagaggctgagcgctgcagttcactttgaggacaccgggaagaccctcttcttctccggg
aaccacgtgtggagttatgatgatgctaaccagactatggacaaagattatccccgccgg
atagaagaggaattccctggaattggcaacaaagtagatgctgtctatgagaaaaatggt
tatctctactttttcaatgggcccatacaatttgaatacagtatctggagtaatcgcatt
gtgagagtcatgccaacaaactccttattgtggtgttaa
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