KEGG   Mastomys coucha (southern multimammate mouse): 116074954
Entry
116074954         CDS       T07224                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO alpha chain
  KO
K06752  MHC class II antigen
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04145  Phagosome
mcoc04514  Cell adhesion molecules
mcoc04612  Antigen processing and presentation
mcoc04640  Hematopoietic cell lineage
mcoc04658  Th1 and Th2 cell differentiation
mcoc04659  Th17 cell differentiation
mcoc04672  Intestinal immune network for IgA production
mcoc04940  Type I diabetes mellitus
mcoc05140  Leishmaniasis
mcoc05145  Toxoplasmosis
mcoc05150  Staphylococcus aureus infection
mcoc05152  Tuberculosis
mcoc05164  Influenza A
mcoc05166  Human T-cell leukemia virus 1 infection
mcoc05168  Herpes simplex virus 1 infection
mcoc05169  Epstein-Barr virus infection
mcoc05310  Asthma
mcoc05320  Autoimmune thyroid disease
mcoc05321  Inflammatory bowel disease
mcoc05322  Systemic lupus erythematosus
mcoc05323  Rheumatoid arthritis
mcoc05330  Allograft rejection
mcoc05332  Graft-versus-host disease
mcoc05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116074954
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116074954
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    116074954
   04612 Antigen processing and presentation
    116074954
   04658 Th1 and Th2 cell differentiation
    116074954
   04659 Th17 cell differentiation
    116074954
   04672 Intestinal immune network for IgA production
    116074954
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116074954
   05164 Influenza A
    116074954
   05168 Herpes simplex virus 1 infection
    116074954
   05169 Epstein-Barr virus infection
    116074954
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    116074954
   05152 Tuberculosis
    116074954
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    116074954
   05140 Leishmaniasis
    116074954
  09163 Immune disease
   05310 Asthma
    116074954
   05322 Systemic lupus erythematosus
    116074954
   05323 Rheumatoid arthritis
    116074954
   05320 Autoimmune thyroid disease
    116074954
   05321 Inflammatory bowel disease
    116074954
   05330 Allograft rejection
    116074954
   05332 Graft-versus-host disease
    116074954
  09166 Cardiovascular disease
   05416 Viral myocarditis
    116074954
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    116074954
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcoc04147]
    116074954
Exosome [BR:mcoc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116074954
  Exosomal proteins of epithelial cells
   116074954
  Exosomal proteins of breast milk
   116074954
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 116074954
NCBI-ProteinID: XP_031203723
LinkDB
Position
Unknown
AA seq 250 aa
MVLFVELVPVFLTIMSFLNPQGVGAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSV
DLKSEEVVWRLPEFGDFAHSDFQSGLMSISMIRDHLDVLVQRSNRTRAVSEPPRVTVIPK
SRVELGKPNVLICIVDDIFPPVISVTWLRNSQPITKGVAQTSFYSQPNHRFRKFHYLTFV
PSAEDVYDCKVEHWGLDAPLLQHWEPQVLTPPPDTVETLICGLGLALGFMGCLLGTVLII
TGTRKSSIRR
NT seq 753 nt   +upstreamnt  +downstreamnt
atggttctctttgtggagctggtccccgtcttcctaaccataatgagcttcctgaatccc
cagggagtaggggccatcaaggccgaccacatgggctcctacggacccgccttctaccag
tcttacgacgcttccggacagttcacacacgaattcgacggggaacaaattttctccgtg
gatctgaagagcgaggaggtcgtgtggcgtctgcctgagtttggagacttcgcacactcg
gactttcagagtgggctgatgagcatctccatgatcagagatcatctggacgtcttggtg
caacgctccaaccgaaccagagccgtcagtgagcctcccagggtgacggtaattcccaag
tctcgtgtggagctgggaaagcccaatgtcctcatctgcatcgtggatgacatcttcccg
ccggtgatcagtgtcacctggctgcgcaacagccagcccatcactaagggagtggcccag
accagcttctactcccagcctaaccacaggttccggaagttccactacctgaccttcgtg
ccctccgcggaggatgtgtatgactgcaaggtggagcactggggcctggacgcgccgctc
ctccagcactgggagccccaggtgcttaccccaccaccggacaccgtagagaccctgatc
tgtggcctgggcctggctcttggctttatgggctgcctcctgggcaccgtgctgataatc
acaggcacgcgcaagtccagtatccgcaggtaa

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