Mastomys coucha (southern multimammate mouse): 116075741
Help
Entry
116075741 CDS
T07224
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01524
Platinum drug resistance
mcoc04115
p53 signaling pathway
mcoc04210
Apoptosis
mcoc04215
Apoptosis - multiple species
mcoc05010
Alzheimer disease
mcoc05012
Parkinson disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05020
Prion disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
mcoc05134
Legionellosis
mcoc05152
Tuberculosis
mcoc05160
Hepatitis C
mcoc05161
Hepatitis B
mcoc05162
Measles
mcoc05164
Influenza A
mcoc05168
Herpes simplex virus 1 infection
mcoc05169
Epstein-Barr virus infection
mcoc05200
Pathways in cancer
mcoc05222
Small cell lung cancer
mcoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116075741 (Apaf1)
04215 Apoptosis - multiple species
116075741 (Apaf1)
04115 p53 signaling pathway
116075741 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116075741 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
116075741 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
116075741 (Apaf1)
05160 Hepatitis C
116075741 (Apaf1)
05164 Influenza A
116075741 (Apaf1)
05162 Measles
116075741 (Apaf1)
05168 Herpes simplex virus 1 infection
116075741 (Apaf1)
05169 Epstein-Barr virus infection
116075741 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
116075741 (Apaf1)
05152 Tuberculosis
116075741 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
116075741 (Apaf1)
05012 Parkinson disease
116075741 (Apaf1)
05014 Amyotrophic lateral sclerosis
116075741 (Apaf1)
05016 Huntington disease
116075741 (Apaf1)
05020 Prion disease
116075741 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
116075741 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116075741 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
116075741 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_RIG_2nd
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_like
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_WDR11_2nd
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_SPT8
Beta-prop_Nup120_160
CARD_2
Beta-prop_DCAF12
Utp8_b_propeller
KNTC1_N
AAA_16
NPHP3_N
AAA_22
Beta-prop_IP5PC_F
ATPase_2
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
116075741
NCBI-ProteinID:
XP_031204923
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMI
LNKDNCAYISFYNALLHEGYKDLAALLHSGLPLVSSSGGKDTDGGITSLVRTVLCEGGVP
QRPVIFVTRKKLVNAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSG
GVHWVSIGKQDKSGLLMKLQNLCSRLDQEENFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKHVVPVESGLGKEKGLEILSLFVN
MKKEDLPVEAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYYQPHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVAYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSQVYQQAKLQAKQEVDTGRLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV
LCCAFSSDDSYIATCSVDKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKNNHLLLATGS
NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLKLWDVKSANERKS
INVKRFFLNSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH
STIQYCDFSPYDHLAVIALSQYCVELWNIDSRIKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLP
EAQVSCCCLSPHLEYVAFGDEDGAIQIIELPNNRVFSSGIRHKKAVRHIQFTADGKTLIS
SSEDSVIQVWNWQAEDCVLLQAHQETVKDFRLLKDSRLLSWSFDGTVKVWNVITRRIERD
FTCHQGTVLSCAVSSDATKFSSTSADKTAKIWSFELLSPLHELKGHNGCVRCSAFSLDGI
LLATGDDNGEIRIWNVSDGQLLHLCAPISVEEGTATHGGWVTDVCFSPDSKMLVSAGGYL
KWWSVATGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccgaaactgtttgcttcaacatagagaagctctggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagtaatggcgtcttaacagtagtagaggag
gaaaaggtcaaaagtcaggccactcaatatcaacgagctgctgctctaattaaaatgata
cttaataaagacaactgtgcctacatttcattctacaacgctctgctccacgagggctat
aaagaccttgctgcgcttctgcatagtggccttcctcttgtgtcttcttccggtggcaag
gacacagacggcggaataacttcacttgtaaggacggtgctgtgtgaaggtggagtacca
cagaggccagttatttttgttacaagaaagaagctggtcaatgcgattcagcagaagctc
tggaaattgaatggagaaccagggtgggttaccatatatggaatggcaggctgtggcaag
tctgtgttagctgcggaggctgttcgagatcattccctcttagaaggttgtttttcaggg
ggtgtccactgggtttccattggaaaacaagacaaatctgggcttctcatgaaactgcag
aatctgtgctcgcggctggaccaggaagagaatttctctcagaggcttccacttaatatt
gaggaggccaaagaccgtctccgtgttctgatgctgcgcaaacacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtgttaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagataagagtgttacagattcagtaatgggtcctaagcatgttgtc
cctgtggagagtggtctagggaaagagaaaggacttgagattttgtctctttttgttaac
atgaagaaagaagatctgccagtggaggctcacagtattataaaggaatgcaaaggttct
cctcttgtcgtgtctttaattggtgcacttttacgtgattttcccaatcgctgggaatac
tacctcagacagcttcagaataagcagtttaagagaataaggaaatcttcatcttatgat
tacgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagacataaaa
gactattacacagatctttccatccttcagaaggatgtcaaggtacctacaaaggtgtta
tgcgttctctgggacttggaaactgaagaagttgaagacatcctgcaggagttcgttaat
aagtctctcttattctgtaatcggaatggaaagtcattttgttattatttacatgatctt
caagtagattttctcacagagaagaatcgaagtcagcttcaggatctgcacaggaagatg
gtcactcagtttcagaggtattaccagccacatacgctctccccagaccaggaggactgc
atgtattggtacaacttcctggcctatcacatggccagtgccaatatgcacaaagaactt
tgtgctttaatgttttccctggactggattaaagcaaaaacagaacttgtcggccctgcc
catctgattcatgagttcgtggcatataggcatatattggatgaaaaggactgtgcagtc
tgtgagaattttcaagagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatattgtacagctgggtctctgtgaaccagagacttcccaagtttatcaacaagca
aagctgcaggccaagcaggaggtggatactgggcgcctttacctggaatggataaacaag
aaaacgatcaagaatctgtcccgcttagttgtccgtccccatacggatgctgtttaccat
gcatgtttttctcaggatggtcagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagccgagacaggagagaagcttcttgacatcaaagctcatgaagatgaggtg
ctttgctgtgcattctcctcagatgacagttacatagcaacctgctcagtggataagaaa
gttaagatttgggattctgcgactgggaagctagtgcacacctacgatgagcactcagag
caagtcaattgctgccatttcaccaacaagaataaccaccttctcttggccaccgggtca
aatgacttcttcctcaagctctgggatttgaatcaaaaagaatgtcgaaataccatgttt
ggccacacaaactctgtcaatcactgtaggttctcaccagacgatgagctcttggctagc
tgttcagctgatgggactttaaagctttgggatgtgaaatcagcgaacgagaggaaaagc
attaatgtgaagcgcttcttcctgaattcagaagaccctcctgaggatgtggaggtgata
gtgaaatgctgttcctggtctgcagatggtgacaaaataatagtggcagcaaaaaacaaa
gtcctcctttttgatattcatactagtggtctattggcagagatccacacaggccaccac
agcaccatccaatactgtgacttctccccctatgaccatttggccgtgattgccctgtct
cagtactgtgtggagttgtggaacatagactcccgcataaaggtggctgactgcagagga
catttgagttgggttcatggtgtgatgttttctcctgatggctcgtcgtttttaacagct
tctgatgaccaaacaataagggtctgggagacaaaaaaggtatgcaagaactctgccatc
gtgctaaagcaggaaatagatgttgtgtttcaggaaaatgaaatgatggttcttgcagtt
gacaacataagaggcctgcaactcattgctggaaaaacaggccagattgattacctgcct
gaagcccaagtgagttgctgctgcctcagtccacaccttgagtatgtggcattcggagat
gaagatggagccattcagattatagaacttccaaacaacagagttttcagttctgggatt
cgacacaagaaagctgtacggcacatccagttcacagctgatgggaagacattgatttca
agttctgaagattctgtgattcaggtatggaattggcaggcagaggactgtgtacttttg
caagcccatcaggaaacagtaaaggacttcaggctcttgaaagattcaagattgctttct
tggtcatttgatggaaccgtgaaggtatggaatgtcattaccagaagaatagaaagagac
tttacttgtcatcagggcacagtgctttcctgtgctgtctcttctgatgccaccaagttt
tcctctacctctgctgataagactgccaagatctggagttttgaactcctttcccctctt
catgagctgaagggccataatggctgtgtccgctgctccgccttctcgctggatggcatc
ctgttggcaactggagatgacaatggagaaatcaggatatggaatgtctcagatggccaa
cttcttcatttgtgtgctccgatttcagtagaagaaggaaccgctacccatggaggctgg
gtgactgatgtttgcttctctcctgacagtaaaatgcttgtctctgctggaggatatctt
aagtggtggagtgttgccactggggaatcctcacagaccttctacacaaacgggacaaac
ctcaaaaaaatacatgtgtcccctgacttcaggacctacgtgactgttgataatcttggt
attttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system
