KEGG   Mastomys coucha (southern multimammate mouse): 116076032
Entry
116076032         CDS       T07224                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03250  Viral life cycle - HIV-1
mcoc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116076032
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    116076032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116076032
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116076032
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase MafB19-deam
Other DBs
NCBI-GeneID: 116076032
NCBI-ProteinID: XP_031205450
LinkDB
Position
Unknown
AA seq 405 aa
MQPQRLESRVGMGTVCLEYSRHRPYEPIRTISQSTFCFHFNNLHYAQGRNDTFLCYEVNR
KDCDSLVSLHQGVFKKEGVDHAELCFLYWFYDQVLKVMSPREEFRITWYMSWSPCFVCAE
QVARFLATHHNLSLAIFCSRFYYPNYPQKLCSLIQEGAQVAAMDLPEFKTCWNKFVDNGG
QPFRPWKRLHKKFKYQDFKLQKILSQISLLREEVFYLQFNNSHWVQPVGNHYYRRKPYLC
YQLEQPNGQKPLTGCLLSKKGRQHAEILFLEKVRSMQLSQVRITCYLTWSPCPNCAWQLA
AFKMDHPDLILRIYASRLYFHWRRAFQKGLCSLWQSGIQVNVMDLPEFTDCWTNFVNPQR
PFMPWNKLEKNSWRSQRRLRRIKESWGLQDLVNDFENLQLGPPLP
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgcaaccccagcgcctggagtccagagttgggatgggaacagtctgcctggaatacagc
cgtcacagaccctatgaacctatcagaacgatatctcaaagtacattctgcttccacttt
aacaacctacactatgcccaaggccgaaatgataccttcttgtgctatgaagtgaataga
aaggactgcgattcacttgtctcccttcaccaaggggtctttaagaaagagggtgtcgac
cacgctgaactctgctttttgtactggttctatgaccaagtactgaaagtcatgtccccg
agggaagagttcagaatcacctggtatatgtcctggagcccctgcttcgtttgcgcagag
caggtagccaggttcctggccacacaccacaacctgagcctggccatcttctgctcccgc
ttctactacccaaactatccgcagaagctctgcagcctgattcaggaaggagcccaggtg
gctgccatggacctaccagaatttaaaacgtgttggaacaagtttgtggacaatggcggc
cagccattcaggccttggaagagactgcataaaaagtttaaataccaggatttcaagctt
cagaagattctcagccaaataagtctgctaagagaagaggtgttctacttgcagtttaac
aacagccactgggtccagccagtcgggaatcactactaccgccggaagccctacctttgc
taccaactggagcagcccaacggccaaaagccactcacaggctgcctcctaagcaagaaa
gggagacagcatgcagaaatcctcttcctggaaaaggttcgttccatgcagctgagccaa
gtgagaatcacctgctacctcacctggagcccctgcccaaactgtgcctggcaactggct
gctttcaaaatggatcacccagacctaattctacgcatctatgcctcccgcctgtatttc
cactggaggagggcattccagaaggggctgtgttctctgtggcaatcagggatccaggtg
aacgtcatggatctcccagagtttactgactgctggacaaactttgtgaacccgcaaagg
ccatttatgccatggaataaactggagaaaaacagctggcgctcgcaaaggcggctccgc
aggatcaaggagtcctggggcctgcaagatttggtgaatgactttgaaaatctacagctt
ggacccccgctgccctga

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