Mastomys coucha (southern multimammate mouse): 116076846
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Entry
116076846 CDS
T07224
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116076846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116076846
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcoc04054
]
116076846
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116076846
Pattern recognition receptors [BR:
mcoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116076846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
NPHP3_N
AAA_16
nSTAND3
AAA_22
NB-ARC
AAA_30
Motif
Other DBs
NCBI-GeneID:
116076846
NCBI-ProteinID:
XP_031206707
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MSDRQKIILASKPQRLETVMLIDSSMVQPDTATEQILEGVSEVSIIMDESEVSIIMDESE
SEQKVTTKVDQHEGQEDVDPTFKTKKHTKVELMKPRPKPKRHLKLTTFPEVYMKQDEILH
STQSLKWKNLFQNFTNLLLLQKLCTRGSENLVSWHPCGPEGGHIIDILFHSNLDSQNEAQ
LVIIEGAAGIGKSTLARLVRRAWKEGLLYRDLFQHVFFFSCRELAQCKQLSLAELIAQGQ
DEPTPPIGQILLHHEKLLFILDGIDEPAWVLEEENPEMCLHWSQRQPVHTLLGSLLGKSI
LPEASFLLTARTTALQNIIPSLEQPSCQVEVLGFTEFERKDYFYKYFAREKDAITAFRLV
ECNPVLLTLCEVPWVCWLVCTCLEKQMEQGEELSLTSQTTTALCLEYLSLTIPGQPMETQ
LRALCSLAAEGICQRRTLFNESDLCKQGLAEGAIDTLVKIGVLQKQPSYLNYSFAQLCLQ
EFFAAMSYILEDSEERHGDMKNNRIVETLMERYGRQTLFEAPTVRFLFGLLSKEGLKEME
KFFSCSLLGKTTLELLWHILGKSKPCQSHYLGLLHCLYENQEMELLTQVMHVLQGIIVPH
TDDKAHTVIQTNMKHLVIQTDMELMVVTFCIKFCYDVRSLQLSKERYGYALTAPTMVLFR
WTPITDASWNIFFFNLNFAKNLEELDLSGNPLGYSAVRNLCKALRYPGCQLKTLWLVECG
LTSTCCSLLAKVLSARSSLTELNLQLNDLGDDGVMMLCEGLRNRACNLHILRLDLLSLSD
QVITELRTLGAKNPKLHIFSTWNPHVMVPPKNIDKEVGDSPTSFKQEQQQSGHKDMEPLG
TEDDFWGPTGPVATEVVDRERNLYRAQLPMAGSYHCPGMGLHFVVTRAVTIEIEFCAWSQ
YLDKTPLQDSHMVVGPLFDIKTEQGAVTAVYLPHFVALQEGTVDSSLFCVAHFQEHGMIL
EMPARVEQHYAVLENPSFSPIGVLLRWIPAVGHFIPITSITLIYYHLNLEDTTFHLYLVP
NDCTIRKAIDEDEKAFQFVRINKPPPVDALYLGSRYIVSGSETVEIFPKELELCYRSSGE
SQLFSEIYIERMGPGIKLQIKDKSHMNLIWETLLKPGDLRPALPRIASAPTDAPSLLHFV
DQHREQLVARVTSVDTLLDKLHSLVLSEDSYEAVRAETTNQNKMRKLFSLSRSWNQDCKD
QFYQALKETHPYLVMDLSDK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagacaaaagataatactagcctccaagccgcaacgactagagacagtcatg
ttaatagactccagcatggtacaaccagatacagccacagagcaaatcctcgaaggagta
tccgaggtctctatcatcatggatgaatctgaggtctctatcatcatggatgaatctgag
tctgaacagaaagttaccacaaaggtggatcagcatgagggacaagaggatgtggatccc
accttcaaaacaaagaaacatacaaaggtggagctgatgaagcccagacccaagccaaag
aggcatttgaagctaacaacctttccagaagtatatatgaaacaagatgagattcttcac
tccacacagtcattgaaatggaaaaatttgttccaaaatttcacaaatctactactcctc
caaaaattgtgcacaagaggctcagagaacttggtcagctggcatccatgtggaccagaa
ggaggacatataattgatatcttatttcactcaaacttagactcccagaatgaggctcag
ttagtcataatagagggggctgctgggattgggaagtcaacactggccaggctggtgagg
agagcctggaaggaaggcctgctctacagggacctcttccagcatgtctttttcttcagc
tgcagagagctggcccagtgcaagcaactaagtctggctgagctcatagcacaaggccag
gatgagcccacacctcccattggtcaaatcctgcttcaccatgagaagctgctcttcatc
ctggatggcatagatgagccagcatgggtcttggaggaggagaatcctgagatgtgtctg
cactggagtcaaagacagcctgtgcacactctgctgggcagtttactagggaaatccatc
cttcctgaggcttccttcctgctcacagctcggacaacagctctacagaacatcattcct
tccttggagcagccgtcgtgtcaggtggaagtgctaggattcactgagtttgaaaggaaa
gactacttctacaaatattttgcaagagaaaaagatgcaattactgcattcagattggtt
gaatgtaacccagtgctcctgaccctatgtgaggttccctgggtgtgctggttggtctgc
acttgcctggaaaagcagatggagcagggtgaagaactctcactgacctcacagaccact
acagccctctgcctggaatatctttccctgacaatcccaggtcagcccatggagactcag
ctcagagccctctgctcactggctgcagaggggatctgccaaagaaggaccctgttcaat
gaaagtgacctctgtaagcaagggttagcagagggtgccattgacactttagtgaagatt
ggtgtccttcaaaagcagcccagctatctgaactacagttttgcccagttgtgtctccag
gagttctttgcagcaatgtcctacatcttggaggatagtgaggaaagacatggtgatatg
aaaaacaacagaattgtagaaacactgatggaacggtatggaagacaaaccctatttgag
gcacccactgtgcgctttttgtttggtcttttgagtaaagagggattgaaagaaatggaa
aagttcttttcctgcagtcttcttgggaagacaacattggagctgctatggcacatccta
gggaaatccaaaccctgtcaatcacattatctgggtttgctacactgtctgtatgaaaat
caggaaatggagctcctgacacaggtgatgcatgttcttcaaggaataatagtgcctcac
acagatgataaggcacacacagtgatccagacaaacatgaaacacctggtgatacagaca
gacatggagctcatggtggtcactttctgcattaagttctgctatgatgtgaggagtctt
cagctgagtaaggaaagatatggatatgcactgacagccccaacgatggttctgttcagg
tggaccccaatcactgatgccagctggaacattttcttcttcaatcttaatttcgccaaa
aacctggaggagctagacctgagtggaaatccactgggctactctgcagtacgcaatctt
tgtaaggccctgagataccctggctgccaactaaagaccttgtggcttgttgaatgtggc
cttacatccacatgctgctcactcctggccaaagtgctcagtgctcgctccagtctgact
gagctaaacctgcagctgaatgacctgggtgacgatggtgtgatgatgctgtgtgaggga
ctcaggaatcgtgcctgcaacctccacatcctgcggctggacctgttgtctctcagtgac
caggtgattacagagctcaggactctgggggcaaagaatccgaagctgcacatcttcagc
acatggaatccacatgtgatggtccctcctaagaacatagataaagaagtgggtgatagt
ccaacctcattcaagcaggagcaacaacagtcaggacacaaagacatggaacctctgggg
actgaggatgacttttggggccctacaggacctgtggctactgaggtggtagacagagag
aggaacctgtaccgagctcaattgcccatggctggttcctaccactgtcctggcatggga
ctccactttgtggtgacaagggcagtgacaatcgagattgaattctgtgcctggagccaa
tacctggacaagactcccttgcaagacagtcacatggtggttgggcctctgtttgacatc
aagactgagcaaggagctgtgactgctgtgtacctccctcattttgtggctctccaagag
ggaaccgtggacagctccttgttctgtgttgcccactttcaagaacatgggatgatccta
gaaatgccagcaagggtggaacagcattacgcagtactggaaaacccaagcttctcccca
ataggagttctactgagatggattcctgctgttggacacttcatccccatcacttccatc
acattgatctactatcacctcaatctcgaggacacgacctttcacctttacctggtcccc
aatgactgcactattcggaaggccattgatgaggacgaaaaggcgtttcagtttgtgcgc
ataaacaagccacccccagtagatgctctttatcttggttcccgctatatcgtgtctggc
tccgaaacggtggaaattttcccaaaggaactcgaactgtgctaccgaagctccggggaa
tcccagctcttctctgagatttacattgaacgcatgggtccagggattaagctgcaaatc
aaagacaagagtcatatgaatctcatatgggagaccttgttaaaaccaggagatctcaga
cctgctctgcctaggattgcttcagcccccacagatgctccttccttgctacactttgtg
gaccagcatcgggagcagctggtggccagagtgacatcagtggacactctcttggacaag
ctgcatagtctggtgctgagtgaagattcctatgaggcagtgcgggctgagaccacaaac
caaaacaagatgaggaagctcttcagcctcagcaggtcctggaatcaagattgcaaagac
caattctaccaagctctgaaggagacccatccttacttggtcatggacctctctgataag
taa
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integrated database retrieval system
