Mastomys coucha (southern multimammate mouse): 116076924
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Entry
116076924 CDS
T07224
Symbol
Eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116076924 (Eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116076924 (Eftud2)
Spliceosome [BR:
mcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116076924 (Eftud2)
Complex C
U5 SnRNP specific factors
116076924 (Eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
116076924
NCBI-ProteinID:
XP_031206875
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDEDEDEDDVGEHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PSSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgaatttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaactgggaagagagacaaaagatcttgatgagatggatgaggatgag
gacgaggatgacgtgggagagcatgatgatgaccaccctgggatggaggtagtgctgcac
gaggacaagaagtactatcccacggccgaggaggtgtacggccctgaggtggagaccata
gtccaggaggaagacacccagcccctcacagagcccattataaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgagatggatttcttagca
gatctgatggacaactctgagctcatccgaaacgtgaccttgtgtggccacctccaccat
ggcaagacgtgttttgtagattgtttaatagaacagacacatccggaaatcagaaagcgc
tatgaccaagatctatgctatactgacatcctcttcacagaacaagagagaggcgtcggc
atcaagagcactcctgtgacggtggtgctgccggacaccaaagggaagtcttacctcttc
aacatcatggacacaccaggtcatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagatggagtagtccttttcattgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcatgccgtgcaggaaaggttagccgtcacggtgtgcatcaacaaaatc
gacaggctgatcttggagctgaagctgcctcctacagatgcttattacaagctgcgacat
attgtggatgaggtcaatggattgatcagcatgtattccactgacgagaacctgatcctt
tctccgctcctgggcaacgtctgcttctccagttcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgctgacacctttggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaatcctaagacgagaaagttcacaaagaaggct
ccaagcagcagctcccagaggagcttcgtggagttcatcttggagcctctctataagatc
ctggctcaggtggtgggtgatgtggacaccagcctgccaaggaccctggacgaacttggc
atccacctcaccaaggaagagctaaagctgaacatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcacattccatct
ccaaaggtgggcgccaaacccaagattgagcatacctacaccggcggcgtggactctgac
cttggagaggccatgagtgactgtgacccagatggtcccctgatgtgccacacgactaag
atgtacagcacagatgatggagtccagtttcacgccttcggccgggtgctgagtggcact
atccatgctgggcagcccgtgaaggtgctgggggagaactacactctggaagatgaggaa
gattcccagatatgcactgtgggccgcctttggatctctgtcgccaggtaccacattgag
gtaaatcgagttcctgctggcaattgggttctgattgaaggtgttgatcagccgatcgtg
aagacagcaaccataactgaaccccgaggcaatgaggaggctcagatttttcggcccttg
aaattcaataccacatctgttatcaagattgcggtggaaccagtgaacccctcagagctg
cccaaaatgcttgatggcctgcgcaaggtcaacaagagctatccgtctctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactggggagctgtacctggactgtgtg
atgcacgaccttcggaagatgtactcagagatcgacatcaaggtggctgacccagttgtg
acgttttgtgagacagtggtagaaacatcctccctcaaatgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgcagagcctcttgagaagggcctcgccgaggacata
gagaatgaggtggtccagatcacctggaacagaaagaagctgggagagttcttccaaaca
aagtacgattgggatctgctggctgcccgttctatctgggcttttggtcctgatgctaca
ggccccaacatcctagtagatgatacactgccctcagaggtagacaaggcccttcttggc
tctgtgaaggacagcattgttcaaggtttccagtgggggaccagggaaggacccctctgt
gatgaattgattcggaatgtcaagtttaagatcctggatgctgtagttgcccaggaaccc
ctccaccggggtggaggtcagatcatccccacggccaggagggtagtgtactctgccttc
ctcatggccactccccgtctgatggagccttactactttgtagaggtccaggctcctgca
gattgtgtgtctgctgtttacacagtcctggccaggcgcaggggtcatgtgactcaggat
gcacccataccaggctcccccctctataccatcaaagcgttcatcccagccatcgactca
ttcggctttgagactgacctccgcactcatacccagggacaggccttttccctatctgtc
ttccaccattggcagattgtccctggtgatcctctggacaagagcattgttatccgccca
ctggagccacagccagctcctcacctggcgcgggagttcatgatcaaaacccgtcgtaga
aagggcctgagtgaagatgtgagtatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaaacaggatgttgtgctcaattatcccatgtga
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integrated database retrieval system
