Mastomys coucha (southern multimammate mouse): 116078493
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Entry
116078493 CDS
T07224
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116078493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116078493
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcoc04054
]
116078493
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116078493
Pattern recognition receptors [BR:
mcoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116078493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
nSTAND3
NB-ARC
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
116078493
NCBI-ProteinID:
XP_031209600
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MEESQCKQKSNTKVAQHEGQDREDLISKLKEDTIATMMKRRPKPKRFLMAGQPTKAYMKQ
GEETLHSTLSLKGENLFQNFTNPLRFQKLCPSGSKNLVRKSWYPQVPEEGGHMIEIQDLF
GPNIGTQKESQLVIIEGAAGIGKSALARQVRRAWSKDHLYRGRFHHVFFFSCRELAQCKQ
LSLAELIAQGQDVPTAPIGQILHHPEKLLFILDGIDEPAWVLEEQNPEMCLHWSQRQPVD
TLLGSLLGKSILPEASFLLTARTTALHKLIPYLGQPCQVEVLGFTEVERENYFYKYFEEQ
RFETTALMVLESNPVLLTLCEVPWVCWLVCTCLEKQMEQGGDLSLTSQTTTALCLEYLSL
TISGQHLSTQLRGLCSLAAEGIWKRKTVFSESDLCKQGLAKGAIDTFLKVGVLQKQPKSL
TYSFAHLCLQEFFTAMSYIVEDSEGRHGDRENDRIVETLVEWYGTQTLFEAPIVRFLFGL
LSKEGLREMEKIFSCSLSGKKKLMLLWHILGKSKRHEPPCLGLLHCLYENQEIELLTHVM
HDLQGTISPGPDDMAHTVFQTNVKYLVVQTDMELMVVTFCIKFCYHIRSLQLNMERQQGY
ELMAPRMVLYRQTPIPDASWKIFFSNLKFTRNLEELDLSGNPLSYSAFCNLCKTLRHPGC
QLKTLWLVECGLTSTYCSLLASVLNAHSSLTELDLQLNDLSDDGVELLCAGLRNHACNLH
ILRLDLSSLSAQVITELRTLEAKNPKLHISSTWMPHMMVPSENVDGEDILTSFKQQQQQS
GDKHMELLGTEDDFWGPTGPVATEVVDRERYMYRVRLPMAGSYHSPSTGLHFVVKRAVNI
EIEFCAWSQYLDKIPLQQSHMVAGPLFDIKAEQGAVTAVYLPHFVSLQETNASTVDFKVA
HFQEHGLVLETPDRVKSRYTVLKNPSFSPMGVVLKIIPAARRFIPITSITLIYYRLNLEE
LTLHLYLIPNDCTIQKAIDEEEMKFQFVRINKPPPVDNLFIGSRYIVSGSENLEITPKEL
ELCYRSSKEFQLFSEIYVGHMGSEIKLQIKNKKHMKLIWEALLKPGDFRPALPRIAQVPK
DVPALQHFMDQHREQLVARVTSVDTLLDKLHSLVLSEDSYEAVRAETTNQDKMRKLFSLS
RSWNRACKDQFYQALKETHPYLVMDLLEKSSIVSLGS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctcagtgcaagcagaaaagtaacacaaaggtggctcagcatgaaggtcaa
gatcgcgaggacctcatctccaaactaaaggaagatacaatcgcgacgatgatgaagcgc
agacccaagccaaagaggttccttatggctggacaacctacaaaagcatatatgaaacaa
ggagaagagactcttcactccacactgtcattgaaaggggagaatttgttccaaaatttc
acaaacccattacgcttccaaaaactatgcccaagtggctcaaagaacttggttagaaaa
agctggtatccacaagtaccagaagaaggaggacatatgattgagatccaagatttattt
ggcccaaacataggtactcagaaagagtctcaattggtcataatagagggggctgctggg
attgggaagtcagcacttgccaggcaggtgaggagagcctggagtaaagaccacctctac
aggggtcgctttcatcatgtcttcttcttcagctgcagagagctggctcagtgcaagcag
ctgagtctcgctgagctcatagcacaaggccaggatgtgcccacagctcccatcggtcag
atcctgcatcaccctgagaagctgctcttcatcctggatgggatagatgagccagcatgg
gtcttggaggagcagaatcctgagatgtgtctgcactggagccaaagacagcctgtggac
actctgctgggcagtttactagggaaatccatccttcctgaggcttccttcctgctcaca
gctcggaccacagctctacacaagctcattccttatttggggcagccatgtcaggtggaa
gtcctaggattcactgaggtggaacgtgagaactatttctacaaatattttgaagaacaa
agatttgaaactaccgcacttatggtgcttgaatctaacccagtgctcctgaccctgtgt
gaggttccctgggtgtgctggttggtctgcacttgcctggaaaagcagatggagcagggt
ggagacctctcactgacctcacagaccactacagccctctgcctggaatacctttccctg
acaatctcaggtcagcacctgagtacccagctcagaggcctttgctcattggctgctgag
ggcatctggaaaagaaagactgtgttcagtgaaagtgacctttgtaagcaaggattagca
aaaggtgccattgacactttcctgaaggttggtgtccttcaaaagcagcccaagtctctg
acttacagttttgcccatttgtgtctccaagagttctttacagcaatgtcctacattgtg
gaggacagtgagggaagacatggtgatagggaaaatgacagaattgtggaaacactggta
gaatggtatggaacacaaaccctatttgaggcacccattgtgcgctttctgtttggtctt
ttgagtaaagagggattgagagaaatggaaaagatcttttcctgcagtctttctgggaag
aaaaaattgatgctgctatggcacatcctagggaaatccaaacgccatgaaccaccttgt
ctgggattactccactgtctgtatgaaaatcaggaaatagagctcttgacacacgtgatg
catgatcttcaaggaacaatatcacctggcccagatgatatggcacacacagtgttccag
acaaacgtgaagtacctggtggtacagacagacatggagctcatggtggtcactttctgc
attaagttctgctatcacataaggagtcttcagctgaatatggaaagacagcaaggatat
gagttgatggccccaaggatggttctgtatagacagaccccaatccctgatgcaagttgg
aagattttcttctctaatcttaaattcaccagaaacctggaggagctggacctaagtgga
aatccactgagctactctgcattctgcaatctttgtaagaccctgagacaccctggatgc
caattaaagaccttgtggcttgttgaatgtggcctcacatccacatactgttcactcctg
gcatcagtgctcaatgctcactccagcctgactgagctagacctgcagctgaatgaccta
agtgacgatggtgtagagctgctgtgtgcggggctcaggaaccatgcctgcaacctccac
atcctgcgactggacctctcctctctcagtgcccaggtgattacagagctcaggaccctg
gaggcaaagaatccgaagctgcacatctccagcacatggatgccacacatgatggtcccc
agtgagaacgtggatggagaggatatcctgacctcattcaagcagcagcaacaacaatcg
ggagacaagcacatggaacttctggggacagaagatgacttctggggccctacaggacct
gtggctactgaggtggttgacagagagaggtacatgtaccgagttcgattgcccatggct
ggttcctaccactctccaagcacaggactccactttgtagtgaaaagggcagtgaacatc
gagattgaattctgtgcctggagccaatatctggacaagattcccttgcagcagagtcac
atggtggctggacctctgtttgacatcaaggctgagcaaggagctgtgactgcagtgtac
ctccctcattttgtgtccctccaagagacaaatgcaagcacagttgacttcaaggtggcc
cactttcaagaacatgggttggttctagaaacaccagatcgagtgaagagtcgttacaca
gtactaaaaaacccaagcttctctccaatgggagttgtactgaaaataatccctgctgcc
cggcgcttcatccccatcacttccatcacactgatctactatcgcctcaatctcgaagaa
ctcacccttcacctctacctaatccccaatgactgcactattcagaaggccattgatgaa
gaagaaatgaagtttcagtttgtgagaataaataagccacccccagtagacaatcttttc
attggctcccgctacattgtgtctggttctgagaacctggaaatcaccccaaaggaactg
gagctgtgctacaggagcagcaaagaattccagctcttctctgagatctacgttggacac
atgggttcagagattaagctgcaaatcaaaaataaaaagcacatgaaactcatatgggaa
gccttgctgaaaccaggagacttcagacctgctctgcccaggattgcccaagtccccaaa
gatgttcctgccttgcaacatttcatggaccagcatcgggagcagctggtggcccgagtg
acatcagtggacactctcttggacaagctgcatagtctggtgctgagtgaagattcctat
gaggcagtgcgggctgagaccacaaaccaagacaagatgaggaagctcttcagcctcagc
cggtcctggaatcgagcctgcaaagaccaattctaccaagctctgaaggagacccatcct
tacctggtcatggacctccttgagaagtcgagcattgtttctttgggatcctga
DBGET
integrated database retrieval system
