Mastomys coucha (southern multimammate mouse): 116078746
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Entry
116078746 CDS
T07224
Symbol
Rapgef3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04015
Rap1 signaling pathway
mcoc04024
cAMP signaling pathway
mcoc04072
Phospholipase D signaling pathway
mcoc04081
Hormone signaling
mcoc04261
Adrenergic signaling in cardiomyocytes
mcoc04670
Leukocyte transendothelial migration
mcoc04720
Long-term potentiation
mcoc04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
116078746 (Rapgef3)
04072 Phospholipase D signaling pathway
116078746 (Rapgef3)
04024 cAMP signaling pathway
116078746 (Rapgef3)
09133 Signaling molecules and interaction
04081 Hormone signaling
116078746 (Rapgef3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116078746 (Rapgef3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116078746 (Rapgef3)
09156 Nervous system
04726 Serotonergic synapse
116078746 (Rapgef3)
04720 Long-term potentiation
116078746 (Rapgef3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
116078746
NCBI-ProteinID:
XP_031209938
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MKVSWPGENHWQVGPAVVESPAVGAPQVGGLPDVVPEGTLLNMVLKRMHRPRCCSYQLVF
EHRRPSCIQGLRWTPLTNSEGSLDFRVSLEQATTEHVHKAGKLLHHHLLATYPTLIRDRK
YHLRLYRQCCSGRELVDGILALGLGVHSRSQAVGICQVLLDEGALCHVKHDWTFQDRDAQ
FYRFPGPEPEPAGTHDVEEELVEAMALLSQRGPDALLSVALRKPPGQRTDEELDLIFEEL
LHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGL
VTTLHEGDDFGQLALVNDAPRAATIILRENNCHFLRVDKQDFNRIIKDVEAKTMRLEEHG
KVVLVLERTSQGSGPSRPPTPGRNRYTVMSGTPEKILELLLEAMRPDSSAHDPTETFLSD
FLLTHSVFMPSTQLFTALLHHFHVEPADPAGGSEQERSTYICNKRQQILRLVGRWVALYS
PMLHSDPVATSFLQKLSDLVSRDARLSNSLREHYPERRRHHRLENGCGNVSPQTKARNAP
VWLPNLEEPLPSSAGAIRVGDKVPYDICRPDHSVLTLHLPVTASVREVMAALAHEDHWTK
GQALVKVNSAGDVVGLQPDARGVATSLGLNERLFVVDPQEVHELTPHPEQLGPTLGSSEM
LDLVSAKDLAGQLTDHDWNLFNRIHQVELIHYVLGPQHLRDVTTANLERFMRRFNELQYW
VATELCLCPVPGPRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGLSNSAISRLAHTWERLP
HKVRKLYSALERLLDPSWNHRVYRLALTKLSPPVIPFMPLLLKDMTFIHEGNHTLVEKNL
INFEKMRMMARAVRMLHHCRSHSTAPLSPLRSRVSHIHEDSQGSRISTCSEQSLSTRSPA
STWAYVQQLKVIDNQRELSRLSRELEP
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagctggccaggtgagaaccactggcaggtgggcccagctgtggtggagagt
ccagctgtgggggcaccgcaggtgggaggtctgccagacgtggttccggagggcacgctg
ctcaatatggtgctgaagagaatgcaccgtccccgctgctgctcttaccagctagtgttc
gagcaccggcgccccagctgcatccagggactacgctggacaccacttaccaacagcgag
ggctccctggatttcagagtgagcctggagcaggccaccacagagcatgtgcacaaggca
gggaagctcttacatcatcatctcttggccacgtaccctaccctcatccgagacagaaaa
taccatctgcgactctatcggcagtgctgctctggccgggagcttgtagatgggatcttg
gctctagggcttggagttcactcacggagccaagccgtgggcatctgccaggtgttgctg
gatgagggtgccctttgccatgtaaaacatgactggaccttccaggaccgagatgcccaa
ttctacaggtttcctggaccggagcccgagcctgcaggaactcacgacgtggaagaggag
cttgttgaagcgatggccctcctgtcgcagcgagggcctgatgccctactctctgtggca
ctccggaagcccccaggtcagcgtacggatgaagaactggacctcatcttcgaggagcta
ttgcatatcaaggcggtggcccacctttctaactcagtgaagcgggaactagctgctgtt
ttgctctttgagccgcacagcaaggcagggactgtgttgttcagccagggggacaagggt
acctcgtggtacattatctggaagggatctgtcaatgtggtgacccatggcaaggggctg
gtgaccaccttgcatgagggagatgactttggacagctggctctggtgaacgatgcacct
cgggcagccaccatcatccttcgagaaaataattgtcattttctgcgtgtggacaagcag
gacttcaaccgcatcatcaaggatgtggaagcaaaaaccatgagactggaagaacacggc
aaagtggtgctggttctggagagaacctctcagggttctggcccttcccgccccccgacc
ccaggcaggaaccggtatacggtgatgtctggcaccccagagaaaatcctagaactcctg
ttagaggctatgagaccggattccagtgctcatgatccaacagagacgttcctcagtgac
ttcctgctgacccacagtgtcttcatgcccagcacccagctcttcaccgccctcctgcac
cacttccatgtggagccggcagaccctgctggaggtagcgagcaggaacgcagcacctac
atctgcaacaagaggcagcagatcctgcggctggtcggccggtgggtggccctgtacagc
cccatgctccactcagatcccgtggccaccagcttcctccagaaactctcagacctggtg
agcagagacgcccggcttagcaactcgctgagggaacattatccagagagacggcgacac
cacaggctggagaacggctgtgggaatgtatctcctcagaccaaggcccggaatgcacct
gtttggctccctaacctggaggaacccctcccaagcagcgctggtgccatcagagttggg
gacaaagtcccctacgacatctgcagacctgaccactcggtgctgaccctgcacctgcca
gtgacggcttccgtgagagaagtgatggcagctttggcccatgaggaccactggaccaag
gggcaggcgctggtgaaggtcaattctgcgggtgatgtcgttggcttgcagccagatgcc
cgcggtgtggccacatccctggggctcaacgagcggctctttgttgtcgacccacaggaa
gtgcatgagctgaccccacaccctgagcagctggggcccactctgggttcttctgagatg
ttggacctcgtgagtgccaaggacctggcaggccagctgaccgaccatgactggaacctc
ttcaacaggatccaccaggtggagctgatccattatgtactgggcccccagcacctgcgg
gatgtcaccaccgcaaacctggagcgtttcatgcgccgcttcaatgagctgcagtactgg
gtggccacggagctctgtctctgtcctgttcctgggccccgggctcagttactccggaag
ttcatcaagctggcagcccacctcaaggagcagaagaatctcaactctttctttgccgtc
atgtttggcctcagcaactcggccatcagtcgcctggcccatacctgggagcgtctgccc
cataaagtacggaagctgtactcggccctggaaaggttgctggacccttcctggaaccac
cgagtgtaccgattggctctcactaagctttcccctcctgtcatccccttcatgccccta
ctactcaaagacatgaccttcatccatgagggaaaccacacactggtagagaagaacctc
atcaactttgagaagatgaggatgatggccagagcagtgcggatgctccatcactgccga
agccacagcaccgcacctctatcacccctcagaagcagagtttcccacatccacgaggac
agccagggatcaaggatctccacgtgttctgagcagtccctgagcacccggagtccagcc
agcacttgggcttacgtccagcagctgaaggtcattgacaaccagcgggaactgtcccgc
ctctcccgggagctggaaccatga
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integrated database retrieval system
