Mastomys coucha (southern multimammate mouse): 116079133
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Entry
116079133 CDS
T07224
Symbol
Smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04140
Autophagy - animal
mcoc05014
Amyotrophic lateral sclerosis
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116079133 (Smcr8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116079133 (Smcr8)
05022 Pathways of neurodegeneration - multiple diseases
116079133 (Smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116079133 (Smcr8)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116079133 (Smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
116079133
NCBI-ProteinID:
XP_031210734
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MISAPDVVAFTKEDEYEEEPYNEPALPEEYSVPLFPYASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSRAS
ECLKMGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELANVE
KSIIEHQDLLRQIRSYPRQKMKMPDLHTGDTEHTQDQADQVSTTSNPEESANADLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRA
LRKQQPITNFLFEDFVEVDDRMEKQENVPSQLSQDRLPPKPIEECPIPKVLISVGSYKSS
VESVLIKMEQELGGEEYKGVEATESSSFDPQENLDYLDMDMKGSISSGESIEVLGTEKSA
SVLSKSDSQASLTVPLSPHVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAI
NEEEAYADNEGAIHFQASAGSPELDETQEGHMENIPSQIDSSCCIGKESEGQLVPLPTPA
YTLSDEDGVVSIPPQRYIQKDQGLHVDFGMESTDPSPRDNSCEMFPAYELDPSCLLASRD
VSKMSLDNYSDTTSYMGSVASTSSDRTPPVPPAGLSSERHKKRAGQNALKFIRQYPFAHP
AIYSLLSGRTLVVLGEDETIVRKLVTALSIFVPNYGCYAKPVKHWISSPLHIMDFQKWKL
IGLQRVASPANVGTLHTLSRYSRYTSILDLDSKTLRCPLYRGTLVPRLADHRTQIKRGST
YYLHVQSMLTQLCSKAFLYTFCHHLHLPAHSEETQEAVASRQTSFLKLNLGLVNEDIRVV
QYLAELLKLHYMQDSPGTTHPLLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcaccaaggaagatgaatacgaggaagaacct
tacaatgagcccgctttgcctgaggagtactcagttcctctttttccttatgccagccag
ggggctaacccctggtctaaactatctggggccaagttctccagggacttcatccttatt
tccgagttctctgagcaggtgggaccccagcccttgcttaccatccccaatgacaccaaa
gtttttggcacttttgatctcaattacttctctttgcggattatgtcagtagattaccag
gcttcattcgtaggccatcctcctggttctgcctacccaaagttgaactttgtggaggac
tctaaagtggtactgggagactctaaggaaggggcctttgcatatgtgcaccaccttacc
ttgtatgatctggaggccaggggctttgtgaggcccttttgtatggcttatatctctgca
gaccagcataaaatcatgcaacaattccaagagctctcagcagaattttccagagcatct
gagtgcttgaagatgggtaacaggaaggcattcgctggggaacttgaaaaaaagctaaaa
gacttggattacacgaggacagtgctacacacagaaacagagatccagaagaaagccaat
gacaagggtttttattcttctcaggcaattgagaaagccaatgaactggccaatgtagag
aagtccatcattgaacatcaagatttgctgaggcagatccgctcataccctcgtcagaag
atgaagatgcctgatttgcatactggtgatacagagcatacccaggatcaggctgaccag
gtatccactacctctaatcctgaggagtcagctaatgcagacctgtatacctgcaggcca
gcctacacccccaaactcatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accttggaggaactttgtgacactgagtatttcactcagaccctggcccagcttagccac
atagaacacatgttcagaggagatctgtgctacctcctgaccagtcagattgacagagca
cttcgaaaacaacagcccataacaaatttcctctttgaagattttgtagaggttgatgac
aggatggagaagcaagagaatgtgccctctcagctcagtcaggacaggctgcctcctaag
cctatagaagaatgccccattcctaaagtgttaattagtgttggctcttacaagtccagt
gtggagtctgtattgatcaagatggagcaggaacttggaggcgaagagtacaagggagtg
gaggcaacagagtcgagcagttttgacccccaagaaaacctggactacctggatatggat
atgaaaggaagcatcagcagtggggaaagcatcgaggttctgggcaccgagaagtcagct
tctgtgttgtcgaaatctgacagccaggccagcctcaccgtgccattgagcccccatgta
gtgcgtagcaaagcggtcagccacaggacaatcagtgaggacagcattgaagtcttaagc
acctgcccttccgaggctctcattcccgacgactttaaggccagctacccaagtgccatt
aacgaagaagaagcctatgcagataatgagggggccatccatttccaggcaagtgccggc
tcaccagaactggatgagactcaggagggccacatggaaaatatcccatcccagatagac
tccagctgctgtattggaaaggagagtgaaggtcaattggtgcctctcccaaccccagcc
tacactctttctgatgaggatggtgtggtgagcattcccccacagcgctacatacagaag
gaccaggggctccacgtggacttcgggatggaaagcactgacccttctcccagagacaac
agttgtgaaatgttcccagcttatgagctggatccaagctgccttctggctagccgagat
gttagtaagatgagcctggataactactcggataccactagctacatgggcagtgtggcc
tctaccagctcggacagaaccccccctgtacctcctgctggcctatcctctgagaggcac
aaaaagagagctggccagaatgccttaaaattcatccgccagtacccctttgcccaccca
gccatctactccctgctcagtgggaggacacttgtggtcctgggcgaagatgaaaccata
gtcaggaagctggtaactgcactgtccatctttgttcccaactatggctgctatgccaag
ccggtgaagcactggatttcctcccctttgcatattatggattttcagaagtggaagctt
attggcctacaaagagtggcctctcctgccaatgtgggtactctccataccctgagccgt
tacagccgctatacaagcatcctggacctagacagcaagaccctacgctgtcccctgtac
aggggtacactggtgccccgcctggctgaccatcgcactcagatcaaacggggcagcaca
tactaccttcatgtccagagcatgctcacccagctctgctctaaggcattcctctatacc
ttttgccaccacttgcatctacctgcccatagtgaggagacacaagaagcagtggccagc
agacaaaccagcttcctaaagctaaacctgggactagtgaacgaggacatcagagtggtg
cagtacctggctgagctgttgaaattgcactatatgcaggattcacctgggaccacccac
ccactgctcaggtttgactatgtccccagctttttgtacaaaatctaa
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