Mastomys coucha (southern multimammate mouse): 116087226
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Entry
116087226 CDS
T07224
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01521
EGFR tyrosine kinase inhibitor resistance
mcoc04010
MAPK signaling pathway
mcoc04014
Ras signaling pathway
mcoc04015
Rap1 signaling pathway
mcoc04020
Calcium signaling pathway
mcoc04072
Phospholipase D signaling pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04540
Gap junction
mcoc04630
JAK-STAT signaling pathway
mcoc04810
Regulation of actin cytoskeleton
mcoc05165
Human papillomavirus infection
mcoc05200
Pathways in cancer
mcoc05206
MicroRNAs in cancer
mcoc05214
Glioma
mcoc05215
Prostate cancer
mcoc05218
Melanoma
mcoc05230
Central carbon metabolism in cancer
mcoc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116087226 (Pdgfrb)
04014 Ras signaling pathway
116087226 (Pdgfrb)
04015 Rap1 signaling pathway
116087226 (Pdgfrb)
04630 JAK-STAT signaling pathway
116087226 (Pdgfrb)
04020 Calcium signaling pathway
116087226 (Pdgfrb)
04072 Phospholipase D signaling pathway
116087226 (Pdgfrb)
04151 PI3K-Akt signaling pathway
116087226 (Pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116087226 (Pdgfrb)
04540 Gap junction
116087226 (Pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116087226 (Pdgfrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116087226 (Pdgfrb)
05206 MicroRNAs in cancer
116087226 (Pdgfrb)
05230 Central carbon metabolism in cancer
116087226 (Pdgfrb)
05231 Choline metabolism in cancer
116087226 (Pdgfrb)
09162 Cancer: specific types
05214 Glioma
116087226 (Pdgfrb)
05218 Melanoma
116087226 (Pdgfrb)
05215 Prostate cancer
116087226 (Pdgfrb)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116087226 (Pdgfrb)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
116087226 (Pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcoc01001
]
116087226 (Pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcoc04090
]
116087226 (Pdgfrb)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116087226 (Pdgfrb)
Protein kinases [BR:
mcoc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116087226 (Pdgfrb)
CD molecules [BR:
mcoc04090
]
Proteins
116087226 (Pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
ig
Ig_3
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116087226
NCBI-ProteinID:
XP_031221652
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MGFPGVMPASVLRGQLLLSVLWLLGPQTSQGLVITPPGPEFVLNISSTFVLTCSSSAPVM
WEQMSQVPWQEAAMNQDGTFSSVLTLTNVTGGDTGEYFCVYNNSLGPELSERKRIYIFVP
DPNMGFLPMDSEDLFIFVTDVTETTIPCRVTDPQLEVTLHEKKVDIPLHVPYDHQRGFTG
TFEDKTYICKTTIGDREVDSDTYYVYSLQVSSINVSVNAVQTVVRQGESITIRCIVMGND
VVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPTAELSDSGTYTCNVSVSVNDHG
DEKAINITVIENGYVRLLGTLGDVQIAELHRSRTLQVVFEAYPTPSVLWLKDNRTLGDSS
AGELVLSTRNVSETRYVSELTLVRVKVSEAGYYTMRAFHEDDEVQLSFKLQVNVPVRVLE
LSESHPANGEQTIRCRGRGMPQPNVTWSTCRDLKRRCPRKLSPTPLGNSSKEESQLETNV
TFWEEDQEYEVVSTLRLRHVDQPLSVRCTLQNSMGGDSQEVTVVPHSLPFKVVVISAILA
LVVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLGHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNAL
PVGLSLPSHLNLTGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIESSSYMAPYDNYVP
SAPERTYRATLINDSPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGIHGLRSPLDTSSVLYTAVQPNESDND
YIIPLPDPKPDAADEGLPEGSPSLASSTLNEVNTSSTISCDSPLELQEEPQQAEPEAELE
QPQESGCSGPQAEAEDSFL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgggatttccaggtgtgatgccagcttcagtcctcagaggccagttgttgctgtccgtg
ctatggctcctgggaccgcagacctcccaaggcctggtcatcacgccccctgggccagag
ttcgtcctcaacatctccagtacctttgttctgacctgctcaagttcagctccagtgatg
tgggaacagatgtcccaggtaccctggcaagaagcggctatgaatcaggacgggactttc
tccagcgtgctgacactgactaatgtcactgggggagacactggagaatacttttgtgtc
tacaacaactcgcttgggccagagctcagtgagcggaagcgtatctatatcttcgtgcca
gatcccaacatgggcttcctccctatggactctgaggacctattcatttttgtcacggac
gtcactgagacgacgattccgtgccgagtgacagacccccagctggaggtgacgctgcat
gagaagaaagtggacatccccctgcacgtaccctacgaccaccagcgaggtttcactggt
acttttgaggacaagacttacatatgcaaaaccaccattggggatagggaagtggactcc
gatacctactatgtctacagcctccaggtgtcatccatcaatgtctctgtgaatgcagta
cagactgtggtccgccagggtgagagcatcaccatcaggtgcattgtgatgggcaacgat
gtggtcaacttccaatggacctatccccgtatgaagagtgggcggctggtggagccagtg
acagactacctctttggcgtgccctcccgcattggctccatcctgcatatccccaccgct
gagctgagtgactcgggcacctatacttgcaacgtgtcagtgagtgtgaatgaccatggc
gatgagaaagccatcaacatcactgtgatcgagaatggctatgtgcggctgctcggaacc
ctgggagacgtacaaatcgctgagctgcaccggagccggacgttgcaggtggtgttcgag
gcttatccgacgccctctgtcctatggctcaaggacaatcgtaccttgggcgactccagc
gctggcgagttggttctgtccactcgcaacgtgtctgagacccggtacgtatcagaactg
accttggtacgtgtgaaggtgtcagaagctggctactatactatgcgagccttccacgag
gacgatgaggtccagctctcgttcaagctgcaggtcaacgtccccgtccgtgtgctggag
ctgagtgagagtcaccctgccaatggggagcagacgatccgctgtcgtggccggggcatg
cctcagccaaatgtcacctggtctacctgcagagacctcaaacgcaggtgtccacgaaaa
ctgtcacccacacccttggggaatagttccaaggaggagagccagctagaaacgaatgtg
actttctgggaggaagatcaggaatacgaggtggtgagcacgctgcgcctgcgtcacgtg
gatcagccactgtcagtacgttgtacgctgcagaactcgatgggcggagattcgcaggag
gtcaccgtggtcccacactccttgcccttcaaagtggtggtgatctcagccatcctggcc
ctagtggtccttaccgtcatctctctcatcatcctcatcatgctgtggcagaagaaacca
cgctatgagatccgatggaaggtcattgagtctgtgagctctgatggccatgaatacatc
tacgtggaccctgtgcagttgccttatgactccacctgggagctgccacgggaccagctt
gttctgggacgaactcttggctctggagctttcggacaggtggtggaggccacggctcac
ggtctgggccattcacaggccaccatgaaagtggctgtcaagatgctgaaatctacagcc
agaagcagtgagaagcaagccctcatgtcggagctgaagatcatgagtcatcttggaccc
catctaaatgtggtcaacctgctgggggcctgtaccaaaggagggcccatctacatcatc
acggaatactgccgctacggtgacctggtggactacctgcaccggaacaaacacaccttc
ttgcagcgacactccaacaagcattgtccgcccagtgcagagctctacagcaacgccctg
ccagtggggctctccctacccagccacttgaacctgactggggagagcgatggtggctac
atggatatgagcaaggatgaatctgtagattacgtgcccatgttggacatgaaaggagac
atcaaatacgcggacattgagtcctccagctacatggccccttatgataactacgtccca
tctgcccctgaaaggacctatcgtgccaccttaatcaatgactcaccagtgctcagctac
acagacctcgtgggcttcagctaccaagtggccaatggcatggagttcttggcctctaag
aactgtgttcaccgagacctggcagccaggaatgtgctcatctgcgagggcaagctggtc
aagatctgtgactttggcctggctcgagacatcatgcgagattcaaactacatctccaaa
ggcagtaccttcctgcctctgaagtggatggccccagagagcatcttcaacagcctctac
accaccttgagtgatgtgtggtcctttgggatcctactctgggagatcttcacactgggt
ggcacgccttacccagagctgcccatgaacgaccagttctacaatgccatcaagaggggc
taccgcatggcccagcctgctcatgcctctgacgagatctatgagatcatgcagaaatgc
tgggaagaaaagtttgagactcgaccccccttctcccagctggtgctgctcctggagagg
cttctgggtgaaggctataaaaagaagtaccagcaggtagatgaggagttcctgaggagc
gaccatccagccatcctaaggtcccaagcccgcttgccagggatccacggcctccgatct
cctctggacaccagctctgttctctatactgccgtgcagcctaatgagagtgacaacgac
tacatcatccccttgcctgaccccaagcctgatgctgctgatgagggcctcccagagggg
tcccccagccttgccagctccaccttgaatgaggtcaacacttcctccaccatctcctgc
gacagtcccctggagctccaagaagagccgcagcaagcagagcctgaggcagagctggag
cagccacaggagtcaggctgctctggacctcaggccgaagcagaggatagcttcctgtag
DBGET
integrated database retrieval system
