Mastomys coucha (southern multimammate mouse): 116089333
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Entry
116089333 CDS
T07224
Symbol
Trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
mcoc04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
116089333 (Trpc5)
09158 Development and regeneration
04360 Axon guidance
116089333 (Trpc5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcoc01009
]
116089333 (Trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116089333 (Trpc5)
Protein phosphatases and associated proteins [BR:
mcoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116089333 (Trpc5)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116089333 (Trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
YVC1_C
Ank
Ank_3
LHD_TRPY1
Ank_2
Motif
Other DBs
NCBI-GeneID:
116089333
NCBI-ProteinID:
XP_031224805
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Position
X
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AA seq
845 aa
AA seq
DB search
MMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVECVSSSEVDSL
RHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAEYEELSQQCKL
FAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKEFVAQPNCQQL
LATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFIKKPFIKFICH
TASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIKEMWDGGFTEY
IHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEALFAISNILSS
LRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYETKAIDEP
NNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNV
ISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKSF
LYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNLVKRYVAAMIR
NSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSSSSAEFSQRDDTNDGSGG
ARAKSKSVSFNLGCKKKACHGAPLIRTMPRASGAQGKPKAESSSKRSFMGPSFKKLGLFF
SKFNGQTSEPTSEPMYTISDGIAQQHYMWQDIRYSQMEKGKAEACSQSEMNLSEVELGEI
RGAAARSSECPLACTSSLHCASGICSSNSKLLDSSEDVFETWGEACDLLMHKWGDGQEEQ
VTTRL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgatggacacccagttctctgagttcacaccagacatcactcccatcatgttggcagcc
cacaccaacaactacgaaatcatcaaattacttgtccaaaagcgggtcactatcccaaga
ccccaccagatccgctgcaactgtgtggagtgtgtatccagttcagaggtagacagtctg
cgtcattcaaggtctcgactgaatatatataaggctctggcaagcccctcgctcattgcc
ttatcaagcgaggaccccatcctcacagccttccggctgggctgggaactcaaggagctg
agcaaggtagaaaatgagttcaaggctgagtatgaagagctctcccaacaatgtaagctc
tttgccaaggacctgctggaccaagctcggagctcccgagaactggagatcatcctcaac
catcgagatgaccacagtgaagaacttgacccacagaagtaccatgacctggctaagctg
aaggtggcaatcaaatatcaccagaaagagtttgtcgctcagccaaactgtcaacaattg
ctggccaccttgtggtatgatggcttcccaggatggcggagaaaacactgggtagtcaag
cttctgacctgcatgaccattggattcctgtttcctatgctgtccatagcctatctgatc
tcacccagaagcaaccttgggcttttcatcaagaaaccctttatcaagttcatctgccac
acagcatcctatctgaccttcctcttcatgcttcttctggcttctcagcatattgtcaga
acagacctccatgttcaaggacctcccccaactgttgtggaatggatgatactgccttgg
gttctaggtttcatttggggggagataaaggaaatgtgggatggtggattcacagaatac
atccatgattggtggaacctgatggattttgcaatgaactccctctacctggcaactatt
tccttgaagatcgtggcctatgtcaagtataatggttctcgtccaagggaagaatgggaa
atgtggcacccgactctgattgcagaagcactcttcgcaatatccaacattttaagttcc
ttgcgtctcatatccttgttcacagccaactcccatttagggcctctgcagatctctttg
ggacgcatgctgcttgatatactcaaatttctctttatctactgcctagtactactggct
tttgccaatggactgaaccagctttatttttactatgagaccaaagctattgatgaacct
aacaactgcaaggggatccggtgtgaaaaacagaacaacgccttctccacgctctttgaa
acccttcagtcactcttctggtctgtctttggcctcttaaatctctatgttaccaatgtg
aaggcccgacatgagttcaccgagtttgtgggagcgaccatgtttgggacatacaacgtc
atctccctggtagtgctgctgaacatgctcatcgccatgatgaacaactcctaccagctc
attgccgatcacgctgatattgagtggaagtttgcgagaacgaagctctggatgagttac
tttgatgaaggtggcaccttaccacctcctttcaacattatccccagccccaaatcattt
ctctaccttggcaactggttcaacaacaccttctgtcccaaaagagaccctgatggaaga
cgaaggaggcacaacttgagaagcttcacagaacgtcatgctgacagcctgatacaaaat
caacattatcaggaagttatcagaaatttagtcaagagatacgtggctgcaatgataaga
aactcgaaaacaaatgaagggctaacagaagagaattttaaggaattaaagcaggacatt
tccagctttcgatatgaagtgcttgacctcttgggaaacagaaaacatccacgaagaagc
ttttccagcagcagcgctgaattctctcaaagggatgataccaatgatggcagtggtggg
gcgcgggccaaatctaagagtgtctctttcaatttagggtgcaagaaaaaggcctgccat
ggagcacctcttatcagaaccatgccaagagctagtggcgcccaaggaaagccaaaagct
gagtcgtcaagcaaacggtccttcatgggtccctctttcaagaaactgggtctcttcttc
tccaagtttaacggtcagacatctgaacctacttcggagccaatgtacacaatctctgat
ggcatcgcacagcagcattatatgtggcaggacatcagatattctcagatggagaaaggg
aaggcagaggcctgttctcaaagtgagatgaacctcagtgaggtagagttaggtgaaatc
cggggtgctgctgctcgaagcagtgaatgccccctagcctgtaccagctctcttcactgt
gcatccggcatctgctcctcaaattcgaaacttttagactcgtcagaggatgtatttgaa
acttggggagaggcttgtgacttgctcatgcacaaatggggtgacggacaggaagagcaa
gttacaactcggctctaa
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