KEGG   Mastomys coucha (southern multimammate mouse): 116090684
Entry
116090684         CDS       T07224                                 
Symbol
Thbs1
Name
(RefSeq) thrombospondin-1 isoform X1
  KO
K16857  thrombospondin 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04015  Rap1 signaling pathway
mcoc04115  p53 signaling pathway
mcoc04145  Phagosome
mcoc04148  Efferocytosis
mcoc04151  PI3K-Akt signaling pathway
mcoc04350  TGF-beta signaling pathway
mcoc04510  Focal adhesion
mcoc04512  ECM-receptor interaction
mcoc04820  Cytoskeleton in muscle cells
mcoc05144  Malaria
mcoc05165  Human papillomavirus infection
mcoc05205  Proteoglycans in cancer
mcoc05206  MicroRNAs in cancer
mcoc05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    116090684 (Thbs1)
   04350 TGF-beta signaling pathway
    116090684 (Thbs1)
   04151 PI3K-Akt signaling pathway
    116090684 (Thbs1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116090684 (Thbs1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116090684 (Thbs1)
   04148 Efferocytosis
    116090684 (Thbs1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    116090684 (Thbs1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116090684 (Thbs1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116090684 (Thbs1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    116090684 (Thbs1)
   05205 Proteoglycans in cancer
    116090684 (Thbs1)
  09162 Cancer: specific types
   05219 Bladder cancer
    116090684 (Thbs1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    116090684 (Thbs1)
  09174 Infectious disease: parasitic
   05144 Malaria
    116090684 (Thbs1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcoc04131]
    116090684 (Thbs1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mcoc00536]
    116090684 (Thbs1)
Membrane trafficking [BR:mcoc04131]
 Endocytosis
  Phagocytosis
   Opsonins
    116090684 (Thbs1)
Glycosaminoglycan binding proteins [BR:mcoc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   116090684 (Thbs1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_2 Laminin_G_3 TSP1_CCN EGF Laminin_G_1
Other DBs
NCBI-GeneID: 116090684
NCBI-ProteinID: XP_031227294
LinkDB
Position
Unknown
AA seq 1171 aa
MELLRGLGVLFLLHMCGSNRIPESGGDNGVFDIFELIGGARKGPGRRLVKGQDLSSPAFR
IENANLIPAVPDDKFQDLLDAVWADKGFIFLASLRQMKKTRGTLLAVERKDNTGQIFSVV
SNGKAGTLDLSLSLPGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCDKMESAELD
VPIQSIFTRDLASVARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVL
LTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGLSCDELSSMVLELRGLRTIVTTLQDSIR
KVTEENRELVSELRRPPLCFHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR
ETKACKKDACPINGGWGPWSPWDICSVTCGGGVQRRSRLCNNPTPQFGGKDCVGDVTENQ
VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDAC
FNHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCP
NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY
NHNPDQADTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE
HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD
NDGVPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENVDISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDMKYECRDS
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagctcttgcggggactaggtgtcctgttcttgttgcatatgtgtggaagcaaccgc
attccagagtctgggggagacaacggtgtatttgacatctttgaactcatcggaggtgcc
cgcaagggccccggtcggcgactggtgaagggtcaagatctatccagcccggcctttcgg
attgagaatgccaacctgatccctgctgtgccggatgacaagttccaagacctcctggac
gctgtgtgggccgacaaaggcttcatcttcctggcttccttgaggcagatgaagaagact
cggggcacactcctggccgtggaacggaaagacaatactggccagatcttcagtgtggtc
tccaacggcaaagcaggcaccctggacttgagtctgagcctgcctgggaagcaacaagtg
gtgtcagtggaggaagctctcctggccaccggccagtggaagagcatcacactgtttgtt
caagaggaccgggcccaactctacattgactgtgataagatggagagcgcggagctggat
gttcccatccagagcatcttcaccagggatctggccagtgtggccaggctccgggttgca
aagggagacgtcaatgacaactttcagggggtcctgcagaatgtgaggttcgtctttgga
accacccctgaagacattctcaggaacaaaggctgctccagctcagctaccaacgtcctt
ctcacccttgacaacaacgtggtgaacggttctagccctgctatccgcaccaactacatc
ggtcacaaaacaaaggacctccaagccatctgtggcctctcctgtgacgagctgtctagc
atggtcctggaactgaggggcctgcgcaccatcgtgaccacgctacaagacagcatccgc
aaagtgacggaagagaacagagagctggtcagtgagctgaggcggcctcccctctgcttt
cacaatggagtccagtacaggaacaacgaggagtggactgtagatagttgtacagagtgt
cactgccagaactcagttaccatctgcaaaaaggtgtcctgtcccatcatgccctgctcc
aatgccacggttcctgatggtgaatgctgcccacggtgctggcccagcgactctgctgac
gacggctggtctccatggtctgagtggacttcctgctctgccacatgtggcaatggaatt
cagcaacgtggccgctcctgtgacagcctcaacaacagatgtgagggctcttcggtacag
acgaggacctgccacattcaggagtgcgacaaaagatttaaacaggatggtggctggagt
cactggtccccgtggtcgtcctgttctgtgacctgtggtgacggtgtgatcacaaggatc
cggctctgcaactcccccagcccccagatgaacgggaagccctgtgaaggtgaagcacgg
gagaccaaagcctgcaagaaagatgcctgcccaatcaatggaggctggggtccttggtca
ccatgggacatctgctctgtcacctgtggaggaggagtgcagagacgaagtcgactctgt
aacaaccccacaccccagtttggaggcaaagactgtgttggtgatgtgacagaaaaccaa
gtttgcaacaagcaggactgtccgattgatggatgcctgtccaatccctgctttgctggt
gccaagtgtactagctatcctgatggtagctggaaatgtggtgcgtgtcctcctggctac
agtggaaatggcatccagtgcaaagacgtcgatgagtgcaaagaagtacctgatgcttgc
ttcaatcacaatggagaacatcggtgcaagaacacagatcctggctacaactgcctgccc
tgcccaccacggttcaccggctcacagcccttcggccgaggcgtcgaacatgccatggcc
aacaaacaggtgtgcaaacctcgaaacccctgcactgatgggacacatgactgcaacaag
aacgccaagtgcaactacctgggtcactacagcgaccccatgtaccgctgtgagtgcaag
cccggctacgcaggcaatggcatcatctgcggagaggacacagacctggatggctggcct
aatgaaaacttggtgtgtgtggccaacgcaacctaccactgcaaaaaggacaactgcccc
aaccttcccaattcagggcaggaagattatgacaaggatggaattggcgatgcctgtgat
gacgacgatgacaatgacaagatccccgatgacagggacaactgtccattccattacaac
ccagcccagtatgactatgacagagatgacgtgggagaccgctgtgacaattgcccctac
aaccataaccctgaccaagcagacacagacaataatggggaaggagatgcctgtgctgtg
gacatcgatggagatggaatcctcaatgaacgagacaattgccagtacgtttacaatgtg
gatcagagggacacggacatggatggggttggagatcagtgtgacaactgccccctggaa
cacaatccagaccagctggactctgattcagaccgcataggggacacctgtgacaacaat
caggacatcgatgaggatggtcatcagaacaatctggacaactgtccctatgtgcctaat
gccaatcaggctgaccatgataaagatggcaaaggagatgcctgtgaccatgacgatgac
aatgatggcgtccctgatgacagagacaactgcaggctggtgcctaatcctgatcagaag
gactctgatggtgatggcagaggtgatgcctgcaaagacgactttgaccatgacaatgtg
ccagacattgatgacatctgtcctgagaatgttgacatcagtgaaaccgatttccgacga
ttccagatgattcctctagatcccaaaggaacctcccaaaatgaccctaactgggttgtc
cgccaccagggcaaagaacttgtccagactgtaaactgtgaccctgggctcgctgtaggt
tatgatgagtttaatgccgtggacttcagcggtaccttcttcatcaacactgagagggat
gacgactacgctggctttgtttttggctaccaatccagcagccgcttctatgttgtgatg
tggaaacaagtcacccagtcttactgggacaccaaccccacaagggctcagggatactca
ggcctgtctgtaaaggttgtgaactccaccactggccctggcgagcacctgcggaatgcg
ctgtggcacacaggaaacactcctggccaggtgcgcaccctgtggcatgaccctcgccac
ataggctggaaggatttcaccgcatacagatggcgtctcagccacaggccaaagaccggc
tttatcagagtggtgatgtatgaaggaaagaaaatcatggctgactctggacccatctat
gacaaaacctacgccggcggtagactaggcctgttcgtcttctctcaagaaatggtgttc
ttctcggacatgaaatacgagtgtcgagattcctaa

DBGET integrated database retrieval system