Mastomys coucha (southern multimammate mouse): 116093409
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Entry
116093409 CDS
T07224
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00310
Lysine degradation
mcoc01100
Metabolic pathways
mcoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116093409 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116093409 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116093409 (Setdb1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
116093409 (Setdb1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116093409 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116093409 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
116093409
NCBI-ProteinID:
XP_031230672
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MSSLPGCMSLAAAPAAADSAEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELESWVLQKESEVAYVDRLFDDASREVTNCESLVKDFYSKLGLQYRDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLGQVSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGLGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDSSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASAMEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGIQFKAMEPLQPIAPPAPLPIPPLSPQAADTESLESQL
AQSRKQVAKKSTSFRPGSVGSGHSSPTSSTLSENVPAGKIGINQTYRLPLASVTSTPAPV
APPGPPAPTGPPAPPGPLAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRP
MRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFET
GCDFLFLEMFCLDPYVLVDRKFQPFKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYS
KERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYK
RLEECLPTGVYECNKRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSF
VCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVASSSDSSGVDMKDQ
EDGNSGSEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENELSEMTSKDSR
LPDLGSPHVPIPPSVSVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSE
GGDGRAGGGRGEAERASTSGLSFKDEGDNKQAKKEDPEDRNKTSVVTEGSQSHGHNPPMK
SEGLRRPASKISMLQSQRVVTSTQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVD
SDDIQTISSGSDGDDFEDKKNLSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGE
SAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAF
FASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttcccgggtgcatgagtttggccgccgcgccagctgccgctgactctgca
gagattgctgagctgcagcaggcagtggttgaagagctgggtatctctatggaggagctt
cgtcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcag
ctggcggagctggagtcatgggtactgcagaaagagtctgaagtggcttatgtggatcgg
ctgtttgacgatgcatctagggaagtgactaattgtgagtctttggtgaaggatttctac
tctaagctgggactacagtatcgtgacagtagctctgaggatgaagcttcccagcctaca
gagataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagcttcgtgaagctatggccgccttaagaaaatca
gctcaagacgtccagaagttcatggatgctgtcaacaagaaaagcagttctcaagatcta
cataaaggaaccttgggtcaggtgtctggagaattgagcaaagatggggacttgatagtc
agcatgaggattctgggcaagaagaggactaagacttggcacaaaggcacccttattgcc
atccagactgttgggctaggaaagaaatacaaagtgaaatttgacaacaaaggaaagagt
ctgctgtctgggaaccatattgcctatgattaccaccctcccgctgacaagctatttgtg
ggcagtcgagtggtggccaaatacaaagatggaaatcaggtctggctttatgctggcatt
gtagctgagactcctaacgtcaagaacaagctcagatttttaattttttttgatgatggc
tatgcttcctatgtcactcagtcagagctgtatcccatttgccgaccactgaaaaagacg
tgggaagacatagaagatagctcctgccgggacttcatagaggaatatatcactgcctat
ccaaaccgcccaatggtacttctcaagagtggccagcttatcaaaactgagtgggaaggc
acatggtggaagtctcgagttgaagaggtggatggcagcctagtcagaatcctctttctg
gatgacaaaagatgtgagtggatctatcgaggctctacacgcctggaacctatgttcagt
atgaagacatcctcagcctctgcaatggaaaagaagcaaggggggcaactcagaacccgt
cctaatatgggtgctgtgaggagcaaaggtcctgttgttcagtacacacaggatctaacc
agtactggaatccagtttaaagccatggagccccttcagcctatagctccaccagcccca
cttcctatacctcctctttcccctcaagcagctgacactgaaagcttagaaagccaactt
gctcaatcacggaaacaagtagccaaaaagagcacatcattccgaccaggatctgtgggt
tctggccattcctcccctacttcgtctacactcagtgaaaatgtccctgctgggaaaatt
gggataaaccagacatataggttacctttggcctcggtaacatctaccccagcacctgta
gcccctccaggacctccagcccccacagggcctccagcccctccagggcctctagctcct
ccagccttccatggcatgttagagcgggcaccagctgagccctcctaccgtgcccccatg
gagaagcttttctatttacctcatgtctgcagttacacttgtttgtcccggatcagaccc
atgaggaacgaacagtatcggggcaagaaccctctattggttccactactgtatgacttc
cggaggatgacagctcggcgcagagttaaccgcaaaatgggctttcacgtaatctataag
acaccctgtggtctctgccttcggacaatgcaggagatagagcgctacctttttgagact
ggctgtgacttcctgttcctggagatgttctgtttggatccttatgttcttgttgacaga
aagtttcaaccctttaagcctttttactatattttggacatcacctatggcaaggaagat
gttcccctgtcctgtgttaatgagattgacacaactcccccaccccaggtggcctacagc
aaggaacgaattcctggcaagggtgttttcattaacacaggccctgaatttctggttggc
tgtgactgcaaggatgggtgtcgggataaatccaaatgtgcctgccatcagctaactatc
caggccacagcctgtaccccagggggtcaagtcaaccctaactctggctaccagtacaaa
agactagaagagtgtctgcccacaggggtttatgagtgtaacaaacgctgcaattgtgac
ccaaacatgtgcacaaatcggttggtgcagcatggactgcaggttcgactacagctgttt
aagacacagaacaagggctggggtatccgctgcttggatgacattgccaaaggctctttt
gtctgcatttatgcaggtaaaatcctgacagatgactttgcagacaaagaaggcctggag
atgggtgatgagtactttgcaaatctggaccacattgaaagtgtggagaacttcaaggaa
ggatatgagagtgatgtcgccagttcctctgacagcagtggggtagatatgaaggaccag
gaagatggcaacagtggttcagaggaccctgaagaatccaatgatgacagctctgatgat
aacttctgtaaggatgaggacttcagcaccagttcagtgtggcgtagctatgctacccgg
aggcagactcggggtcaaaaggagaatgaactgtctgagatgacttccaaggactcccgc
ctcccagacctagggtctccacatgttcctatccctccctcagtatctgtagggggctgc
aatccaccttcctctgaagagacacccaagaacaaggtggcctcttggttgagctgcaat
agtgtcagtgaaggtggatttgctgactctgacagccgttcctccttcaagactagtgaa
ggtggagatggccgtgctgggggaggccggggagaggctgaaagggcctccacctcagga
ttgagcttcaaagatgaaggagacaataagcaggctaaaaaagaggaccctgaggaccga
aacaagacgtcagtagttacagaaggctctcagagtcatggacacaatcctcccatgaag
tctgaagggcttcgccgaccagctagtaaaatttctatgctccagagccagcgagttgtg
acttctactcagtcaaaccctgatgatatcctgacactgtccagcagcacagagagtgag
ggggaaagtggaaccagccgaaagcccactgctggtcagacgtcagccaccgctgtggac
agtgatgacatccagaccatctcttctggctctgatggtgatgactttgaggacaagaag
aacttgtcaggtccaacaaagcgacaggtggcagtaaaatcaacccgaggctttgctctt
aagtcaacccatggtattgctattaaatcaaccaacatggcttccgtggacaaaggggag
agtgcaccagttcgtaaaaacacgcgccagttctatgatggtgaagagtcttgctacatc
attgatgccaaacttgaaggcaacctaggccgctacctcaatcacagttgcagccccaac
ctgtttgttcagaatgtttttgtggatacccatgatcttcgcttcccttgggtggccttc
tttgccagcaagagaatccgggctggaacagaactcacttgggactacaactacgaagtg
ggcagtgtggaaggcaaggagctgctgtgctgctgtggggccattgaatgcagagggcga
cttctttag
DBGET
integrated database retrieval system
