KEGG   Mastomys coucha (southern multimammate mouse): 116099586
Entry
116099586         CDS       T07224                                 
Symbol
Cd4
Name
(RefSeq) T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03250  Viral life cycle - HIV-1
mcoc03260  Virion - Human immunodeficiency virus
mcoc04060  Cytokine-cytokine receptor interaction
mcoc04514  Cell adhesion molecules
mcoc04612  Antigen processing and presentation
mcoc04640  Hematopoietic cell lineage
mcoc04658  Th1 and Th2 cell differentiation
mcoc04659  Th17 cell differentiation
mcoc04660  T cell receptor signaling pathway
mcoc05135  Yersinia infection
mcoc05166  Human T-cell leukemia virus 1 infection
mcoc05170  Human immunodeficiency virus 1 infection
mcoc05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
mcoc05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116099586 (Cd4)
   03260 Virion - Human immunodeficiency virus
    116099586 (Cd4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116099586 (Cd4)
   04514 Cell adhesion molecules
    116099586 (Cd4)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    116099586 (Cd4)
   04612 Antigen processing and presentation
    116099586 (Cd4)
   04660 T cell receptor signaling pathway
    116099586 (Cd4)
   04658 Th1 and Th2 cell differentiation
    116099586 (Cd4)
   04659 Th17 cell differentiation
    116099586 (Cd4)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    116099586 (Cd4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116099586 (Cd4)
   05170 Human immunodeficiency virus 1 infection
    116099586 (Cd4)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    116099586 (Cd4)
  09163 Immune disease
   05340 Primary immunodeficiency
    116099586 (Cd4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:mcoc04090]
    116099586 (Cd4)
CD molecules [BR:mcoc04090]
 Proteins
  116099586 (Cd4)
SSDB
Motif
Pfam: CD4-extracel C2-set ig Tcell_CD4_C V-set Ig_3 I-set Ig_2 ArgZ-like_C_1st
Other DBs
NCBI-GeneID: 116099586
NCBI-ProteinID: XP_031239245
LinkDB
Position
Unknown
AA seq 459 aa
MCRGISFRHLLLLQLQLSQLLAVTQGKMVVLGKEGLSVELPCQSSQKKNTIFTWKLPDQT
KKILGQQGNGVLVKGSFGSLYDRFDSRRGTWDRGSFPLIINKLKLEDAQTYVCELENRKE
EVELWVFRVTISPGTSVLQGQSLTLTLDCNPKVENPLMECKHKRGKTVKGSKVLSMRNLR
IWDSDFWNCTVTLNQKKSSFGMQLSVLGFQSTSITAYKSEGESAEFSFPLNFEEERLQGE
LTWKAEKASFYQHWITFSLKDKRVSVEKSTNTLKLQLAETLPLTLKIPQVSLPFAGSGNL
TLTLNKGRVHQEVNLVVMKVAQLHNNTLACEVAGPTSPKMRLTLKQEDQEARVSREQKMV
QVMAPEAGMWQCLLSEGEEVKMNSRIQVLSRGLNQTVFLASVLGGTFGFLAFLGLCILCC
VRCRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKTHNLI
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtgccgaggcatctcttttaggcacttgctgctcctgcagctgcagctatcacaactc
ctagctgtcactcaagggaagatggtggtgctggggaaagaagggctttcagtggagctg
ccctgccaaagttcccagaagaagaatacaatcttcacctggaagttgcctgaccagaca
aagaagattctgggacagcagggtaacggtgtattggttaaaggttcgtttgggagcctg
tatgaccgtttcgattccagaagaggtacgtgggacagaggatcgtttcctctcatcatc
aataaacttaagctggaagacgctcagacttatgtctgcgagctggagaacaggaaagag
gaggtggagctgtgggtgttcagagtgaccatcagtccgggtaccagcgtgttgcagggg
cagagcttgaccctgaccttggattgcaaccctaaggtcgagaaccccttgatggagtgc
aaacacaaaaggggtaaaactgtcaagggctccaaagttctttccatgcgcaacctaagg
atttgggacagtgacttctggaactgcaccgtgaccctgaaccagaaaaagtcctcgttc
ggcatgcaactctccgtgttgggttttcagagcacatctatcacggcctataagagtgag
ggggagtcagcagagttctccttcccactcaacttcgaagaggaaaggctgcagggagag
ctgacatggaaggcagagaaggcttctttctaccagcactggatcaccttctccctaaag
gacaaaagggtgtccgtggaaaagtccaccaacaccctcaagctccaactggcggaaacg
ctcccactcaccctcaagataccccaggtctcgcttccctttgctggttctggcaacctg
actctgactctgaacaaagggagagtgcatcaggaagtgaacctggtggtgatgaaagtg
gctcaactccacaacaacactttggcctgtgaggtggcgggacctacctcccccaagatg
agactgaccctgaagcaagaagatcaggaggccagggtctccagggagcagaaaatggtt
caagtgatggcccctgaggcaggaatgtggcaatgtctactgagtgagggtgaagaggtc
aagatgaactccaggatccaggttttatccagagggttgaaccagacagtgttcctggct
agcgtgctggggggtaccttcggctttctggctttccttgggctctgcatcctctgctgt
gtcagatgccggcaccaacagcgccaggcagcacggatgtctcagatcaagaggctcctc
agtgagaagaagacctgccagtgcccccaccggatgcagaagactcataatctcatctga

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