Mastomys coucha (southern multimammate mouse): 116101290
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Entry
116101290 CDS
T07224
Symbol
Hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116101290 (Hps6)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
116101290 (Hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
116101290
NCBI-ProteinID:
XP_031240751
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MKRAGTLRLLSDLSNFTGAARLRELLAGDPAVLVRCSPDGRHLLLLRPPGSPAPQLLVAV
RGPGLPLERAWPEGDPSPLDVFFVPWLARPALILVWESGLAEVWGVGMEPGWKLLQSTEL
CPDGGARVMAVAATRGRLVWCEERQLGVEDPPGQLSKAFSHCVCFKTLETSGEAGTKLGC
THILLHHCPSFGLIASRKDLFLVPTPTTWPGVAHVLLIWSPSKGKVIVAAPSLGLSHSKN
LSPKQGDTWDFRTLLRGLPGFLSPREPLAVHTWAPSSQGLLLLDLKGKVSLVQCHGGTRT
VGILQEAPVGLEGSAALGTFHGTLACVLGSTLELLDMSSGQLLERKVLSTDRVHLLEPPA
PGMKNEEELETRGALRLLSALGLFCVCWEVPQGLELPSDKDLVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSTLLTTLRAELRDYRSIEQLKAQLVAGDDEEA
GWTELAEHEVARLLRTQLTGDQLAQFNTIFQALPTAAWSATLQALRLQPDRSGRLRSQAP
PDVWKKVLRAPTAGKEHPNGILPPFELLCQCLGQLEPQWLPPFVKLAQQQGGPGWGAEGP
SLPLYRRALAVLGEEGKRPEALELELLLGSGRPKAVLQAVRQLIKKEQWERALEAGLTLD
SSSPLLRSEIFKLLLAEFARHRRLDAHLPLLCRLCPPEVAPNELLLLLRTHLPDDEGTTP
FPGPGAEPPLTVGLVRALLEQTGAQGRPSGPVQSAYEEILWDPGTPPPTPPRGPTTSLQA
SDHPGQEAWVPSGQGLGTADVGVHL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcaggaactctgcgcctgctttcggatctgagcaacttcaccggcgcggcc
cggctccgcgagttgttggcgggggatccagccgtcctagtccgctgcagccctgacggc
cgccacttgctgctgttaagaccccccggatcgcccgccccgcaacttctagtggctgtg
cgtgggccgggcctgccgctggagcgtgcctggccggagggcgacccctcgccgctggat
gtctttttcgtgccgtggctggcgcgaccggctctgatcttggtatgggagagtggccta
gcagaggtgtggggcgtagggatggagcctggatggaagctacttcagagcactgaattg
tgtccggatggtggagcccgcgtgatggccgtggcagcaacccgaggccgcctagtttgg
tgcgaggagcgtcagcttggcgttgaggacccaccagggcagctttcaaaggccttcagc
cactgtgtgtgcttcaagaccctggaaaccagcggggaggctggcaccaaactaggttgc
acccacatcctgctacaccattgcccctcttttggactgatagcctcccgcaaggacctc
ttcctggtgcctactcccaccacttggcctggtgtggcccatgtactgctcatctggagc
ccaagcaaggggaaggtaatagttgctgctccatctcttggtctttctcacagtaaaaac
ctgagtcccaaacaaggggatacttgggactttcggaccctgcttcgaggccttcctgga
ttcctgtcccccagggagccactggctgtacacacttgggccccatcctctcagggcttg
ttattgcttgacttgaaaggtaaggtgagcctagtgcagtgccatggtggtactcgaacc
gtgggaatcctgcaggaggcccctgtaggcctagaagggtcggcagccctgggaacattt
catggcactttagcctgtgtcctgggctccactttggaactactggacatgagcagcggg
cagctgttggaaaggaaggttctcagtacagacagagtacatctgctggagcctccagcc
cctggcatgaagaatgaggaagagctggagacccgaggagctctccgtttgctgtcagcc
ttgggtctcttttgtgtgtgttgggaagttccccaaggccttgagctgccctcagacaag
gatctggtgtttgaggaggcctgtgggtactaccagcgtcggagccttcgaggtacccag
cttacaccagaagaactgcgacacaacagcatgttccgggcacctcaggccttggcctcc
atcctccagggccacctgcccccatccacactcttgacgaccctgagggcggagctccgg
gattatcggagtatagaacagctcaaggcccagctggtggctggagacgacgaggaagct
ggctggactgagttagctgagcatgaggtggcccgcctgctgaggacccagttgacagga
gaccagctggcccaattcaacaccattttccaagcccttcccacagccgcttggagtgcc
accctccaggccctgcggctccagccagataggagtggcaggctgaggtcccaagcaccc
ccggatgtttggaagaaggtactaagggctcccacggccggaaaggaacaccccaatgga
atactgccgccctttgaactcctgtgccagtgcctaggccagctagagcctcagtggctc
cccccatttgtgaaactggcacagcaacagggtggtccaggctggggggctgaaggcccc
agtctacccctttaccgccgagccctggcggtattaggtgaggaagggaagagacccgag
gctctagaactcgagctgcttctgggcagcgggcgacccaaagccgtgctgcaagctgta
aggcagctgataaagaaagaacagtgggaaagggctctggaggccggcctgaccctggac
tcctccagccccctacttcgaagcgagatctttaagctgctgctggcagagtttgcccgg
catcgccgcctcgatgcacacctccctctcctctgtcgcctgtgcccaccggaagtggct
ccaaatgagctcctgcttctgctgaggacacatctcccagatgatgagggaaccacccct
ttccctgggcctggggccgagccccctctcacagtgggcttggtcagagccctgctagaa
cagactggggctcaaggaaggccctctggcccagttcaaagcgcctatgaggaaattcta
tgggatccaggcactccaccccctaccccacctcgtggacctactacttctctccaggca
tcagaccacccaggacaggaagcctgggtaccatctggacaggggcttggcacagctgat
gtgggagttcatttgtag
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