Mastomys coucha (southern multimammate mouse): 116101825
Help
Entry
116101825 CDS
T07224
Symbol
Arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04270
Vascular smooth muscle contraction
mcoc04611
Platelet activation
mcoc04810
Regulation of actin cytoskeleton
mcoc04928
Parathyroid hormone synthesis, secretion and action
mcoc05135
Yersinia infection
mcoc05163
Human cytomegalovirus infection
mcoc05200
Pathways in cancer
mcoc05205
Proteoglycans in cancer
mcoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116101825 (Arhgef1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
116101825 (Arhgef1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
116101825 (Arhgef1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116101825 (Arhgef1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116101825 (Arhgef1)
05205 Proteoglycans in cancer
116101825 (Arhgef1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116101825 (Arhgef1)
09171 Infectious disease: bacterial
05135 Yersinia infection
116101825 (Arhgef1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116101825 (Arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116101825 (Arhgef1)
Membrane trafficking [BR:
mcoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116101825 (Arhgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
AbiJ_NTD3
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
116101825
NCBI-ProteinID:
XP_031241551
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MGEVAGGAAPGPPRSGLVSIIIGAEDEDFENELEAVSRNSEDQNSQFQSLEQVKRRPAHL
MALLQHVALQFEPGPLLCCLHADMLSSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVA
FELDRTRPDLISEDVQRRFIQEVVQSQQAAVSRQLEDFRSKRLMGMTPWEQELSLLEPWI
GKDRGNYEARERHVAERLLSHLEEIQHTISTDEEKSAAVVTAISLYMRHLGVRTKSGDKK
SGRNFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNRGEPSAPDCRHLKVEVDAEKPGPA
DRKGGLGTSSRDRTVGTPGQDNPGISLHPLSTDSLDSRDPGVDTPQEPGDTPPQGPTSLE
PLVPPESTEDNGETERRWKRWVPGPWVGGGPALPHLSQPLPLPMATSSPSPPVRGGVVRL
SGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPGSATAVLGPTRRATYVTSP
FPEPGDDGEPGRSGLELEPEEPPGWRELVPPDTLLSLPKSQVKRQEVISELLVTEAAHVR
MLRVLHDLFYQPMADGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIG
DVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEAESRPRCRRLQ
LKDMIPTEMQRLTKYPLLLQSIGQNTEEPAERGKVELAAECCREILHHVNQAVRDMEDLL
RLKDYQRRLDLTHIRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKAVEVHVLLLDD
LLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVIFTWDH
EAQIYELVAQTSSERKNWCALITETAGSLKVPAPASRHKPRPSPSSTREPLLSSSENGTG
GTEIAPADARTERILNDLLPFCRPGPEGQLAATALQKVLSLKQILLSTEEDSGAGPPSNG
DGVPGGGAPSPAHTQEIEENLLSLEVAIRQLEELEEEFCRLRPLLSQLGGTLSPNLAAPE
RSAQTGLS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagtcgccggaggggcggccccagggcctccccggtctggcctggtgtccatc
atcatcggggctgaggatgaggattttgagaacgagctggaggcggtgagcaggaactca
gaagatcaaaacagccaattccagagcctggagcaagtgaaacgacgcccagcccacctc
atggccctcctgcagcacgtggccctgcagttcgagccaggaccactgctctgctgcctg
cacgcagacatgctaagctcactgggccccaaagaagccaagaaagccttcctcgacttc
tatcacagtttcctggagaagactgcggttcttcgggtgcccgtccctcccaatgtcgct
tttgaacttgatcgtactcggcctgatctcatctctgaggatgtccagaggcggttcata
caagaggtggtgcagagccagcaggcagccgtgagccgtcagctagaggacttccgctcc
aagcggctcatgggcatgacgccctgggagcaggaactgagcctgctagaaccttggatt
gggaaagaccgaggcaactatgaggcccgggagcggcatgttgcagagcggctgctctcc
cacctagaggaaatccaacataccatctctacagatgaagagaaaagcgctgctgtggtc
actgccatcagcctctatatgcgccaccttggggtccggaccaagagtggggacaagaag
tcagggaggaacttcttccggaaaaaggtgatggggaatcggaggtcagatgagcccccc
aagacaaagaaagggctgagcagtatcctagatcctgcccgttggaaccggggagagcca
tctgctccagattgtcgacatctaaaggtcgaggttgatgcagagaagccaggccctgca
gatcggaagggaggcctgggtacgtcttctcgggacaggactgttgggactcctgggcag
gacaacccaggaatctccctgcaccctctgtctacagacagcctcgactcccgggatcca
ggtgtggataccccgcaggagccaggggatacacctccacagggccctaccagcctggag
cccctggtgcccccagagagcacggaggacaatggcgagactgagagaaggtggaagagg
tgggtgcctgggccctgggtggggggagggccagccctcccccatctctcccagcccctc
cccctccccatggccacctcctccccttcaccccctgtgaggggaggggtggttaggctg
tcagggcgtctggggcgctcagagagcctgcgggtgagtgaccgccgccggccttcccgg
ggcagcctcggggctaagggccggggtgggggccgttcccggagcgacgtggacatggac
ccaggctccgctacggccgtgcttggccctacccgacgagccacgtacgtcacttccccc
ttccctgagcctggagatgatggggagccaggacgctcaggcctggaactggaaccagaa
gaacctcctgggtggagggaactcgttcccccagacactctgctcagcctgcccaaaagc
caagtgaagcggcaagaagtcatcagcgagctgctggtgacggaggcagctcacgtgcgc
atgctacgggtactgcatgacctcttctaccagcccatggcagatggaggcttcttccct
ctggaggagctgcagaacatcttccccagcctggatgagctcatcgaggtgcactccctg
ttcctcgatcgcttgatgaagcggagacaagagagtggctacctcattgaggagatcggt
gatgtgctactggcccggttcgatggtgctgagggttcatggttccagaagatctcctcc
cgcttctgcagccgccagtcattcgctctagagcagctcaaagccaagcagcgcaaggag
cctcgattctgtgccttcgtgcaggaagctgagagccgcccacgatgccggcgcctacaa
ttaaaggacatgatccccactgagatgcagcgactgaccaagtacccactgctgctacag
agtattgggcagaacacagaagagcctgcggaacgggggaaagtggagcttgccgctgag
tgctgccgtgagattctgcaccatgtcaatcaagccgtccgtgacatggaggacctgctg
cggctcaaggattaccagcgtcgcctggacttgactcacatacggcagagcagtgaccct
atgctgagcgagttcaagaaccttgacatcactaagaagaagttggtccatgaaggcccc
ctcacatggcgagtaaccaaagacaaagctgtagaggtgcacgtgctcttgctggacgac
ctgctgctgctgctccagcgccaggatgagaggctgctgctcaagtcgcacagccggaca
ctgacacccacgcctgacggcaagaccatgcttcggcctgtgctccggctcacctctgcc
atgacccgagaggtggccactgatcacaaagctttctacgtcatttttacctgggaccat
gaagcccagatatatgagctggtggcacagacatcgtcagaacgcaagaactggtgtgcc
ctcatcactgagactgccggatccctgaaggtccctgcccctgcctcccgccacaaaccc
cggcccagcccaagcagcacccgagagcccctgctaagcagctctgagaatggcactgga
ggcacagagattgctccagctgatgcccggacagagcggatcctcaatgacctcctgccc
ttctgcagaccaggcccagagggccaacttgctgccacagcccttcaaaaagtactgtcc
ctgaaacagatcctgttaagcactgaggaagacagtggagcggggcctcccagcaatggt
gatggggtgcctggtggtggtgcccccagcccagcacacacccaggagattgaggaaaac
ctgcttagcctagaagtggccatcagacaactggaggagttagaagaggaattttgtcgc
ctaagacccctcctgtctcagcttggagggactctgtcccccaacctggctgcacctgaa
cgctctgctcagacaggcctttcatga
DBGET
integrated database retrieval system
