Mastomys coucha (southern multimammate mouse): 116102190
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Entry
116102190 CDS
T07224
Symbol
Trpm4
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04911
Insulin secretion
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
116102190 (Trpm4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116102190 (Trpm4)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116102190 (Trpm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Csm1_N
Motif
Other DBs
NCBI-GeneID:
116102190
NCBI-ProteinID:
XP_031242449
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MVGPEKEQSWVPKIFRKKVCTTFIVDLSDDDAGGTLCQCGQPRDVHPSVAMEDAFGAAVV
TEWNSDEHTTEKPTDAYGDLDFMYSGRKPSNFLRLSDRTDPATVYSLVTRSWGFRAPNLV
VSVLGGSGGPVLQTWLQDFLRRGLVRAAQSTGAWIVTGGLHTGIGRHVGVAVRDHQTAST
GGSKVVAMGVAPWGVVRNRDMLINPKGSFPARYRWRGDPEDGVEYPLDYNYSAFFLVDDG
TYGRLGGENRFRLRFESYVSQQKTGVGGTGIDIPVLLLLIDGDEKMLKRIEDATQAQLPC
LLVAGSGGAADCLVETLEDTLAPGSGGLRRGEARDRIRRYFPKGDPEVLQAQVERIMTRK
ELLTVYSSEDGSEEFETIVLRALVKACGSSEASAYLDELRLAVAWNRVDIAQSELFRGDI
QWRSFHLEASLMDALLNDRPEFVRLLISHGLSLGHFLTPVRLAQLYRAVSPNSLIRNLLD
QASHASSSKSPPVNGAVDLRSPNVGQVLRTLLGETCAPRYPARNIRDSHLGQDHRENDSL
LMDWANMQPSMDASFEQAPWSDLLIWALLLNRAQMAIYFWEKGSNSVASALGACLLLRVM
ARLEWEAEEAARRKDLAATFESMSVDLFGECYHNSEERAARLLLRRCPLWGEATCLQLAM
QADARAFFAQDGVQSLLTQKWWGEMDSTTPIWALLLAFFCPPLIYTNLIVFRKSEEEPTL
KDLDSDMDSSINGAGPPGPAETSAKVALERRRQRRPGHALCCGGFSKRWSHFWGAPVTAF
LGNVLSYLLFLLLFAHVLLVDFQPSEPGVFELLLYFWAFTLLCEELRQGLGGGWGSLASG
GPGPGQAPLRHRLHLYLSDTWNQCDLLALTCFLLGVGCRLTPGLFELGRTVLCLDFMIFT
LRLLHIFTVNKQLGPKIVIVSKMMKDVFFFLFFLCVWLVAYGVATEGILRPQDRSLPSIL
RRVFYRPYLQIFGQIPQEEMDVALMIPGNCSMERGSWAHPEGPVAGSCVSQYANWLVVLL
LIVFLLVANILLLNLLIAMFSYTFNKVHGNSDLYWKAQRYSLIREFHSRPALAPPLIIIS
HVRLLIKWLRRCRCRRANLPASPVFXXXXFGVCLSKEAERKLLTWESVHKENFLLAQARD
KRDSDSERLKRTSQKVDTALKQLGQIREYDRRLRGLEREVQHCSRVLTWMAEALSHSALL
PPGGPPPPTPPGSKGYSPSVREAGREHGPSHPITRKLTAKDMHQKPQNNAVRWTTAPSIQ
AASAYSSGFLTPGNRIVHSGLGLPTHLAIEIIPHRHAHRSI
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggtggggccggagaaggagcagagctgggtccctaagatcttcaggaagaaggtgtgc
acgacgttcatagtggacctctccgatgatgatgctggagggaccttgtgccagtgtggg
caacctcgggatgtacacccttctgtggctatggaggatgcctttggggcagccgtagtt
acggagtggaacagtgatgaacataccacggaaaagcccacagatgcctacggggacctg
gacttcatgtactctggccgaaagcccagcaactttcttcggctgtctgaccgcacggat
ccggccactgtgtacagtctcgtcacccgctcttggggctttcgtgccccaaacttggta
gtgtcggtgctgggggggtcggggggccccgtgctccagacctggctacaggactttctg
cgtcgtgggctggtgcgagccgcccagagcacaggggcctggatcgttactggaggactg
cacacaggcataggccggcatgtgggtgtggctgtgagggaccaccagacggccagcact
gggggcagcaaggtggtggccatgggtgtggccccctggggagtggtccggaacagagac
atgctgatcaaccccaagggctcattccctgcaaggtaccggtggcgtggtgaccctgag
gatggagttgagtaccccctggactataactattctgctttcttcttggtggacgacggc
acctatggccgcctgggtggtgagaaccgcttccgacttcggttcgagtcctatgtgtct
cagcagaagactggagtgggagggactggaattgacatccctgtgctccttcttctcatc
gatggtgatgagaagatgttaaagcggatagaagatgctacccaggctcagctcccttgc
ctcctggtggcgggctctggaggtgctgcagactgcctggtggagaccctggaagatact
ctggccccaggaagtgggggactcaggagaggcgaggcccgggatcggattaggcgttac
ttccctaaaggagaccctgaggtccttcaggcccaggtagagaggatcatgacccgaaag
gagttgctgacggtttattcatcagaagatggctctgaagagtttgagactatcgttttg
agagctcttgtgaaagcctgtgggagctctgaggcctcagcctacctggatgagctgcgt
ttggctgtggcttggaaccgcgtggacattgcccaaagtgaacttttccgtggggacatc
caatggcggtccttccacctggaggcttctctcatggatgctctgctgaatgaccggcct
gaatttgtgcgcttgctcatctcccatggccttagcctgggacacttcctgacccccgtg
cgcctggcccagctgtaccgtgcagtgtcccctaactcactgatccgcaatcttctggac
caggcgtcccatgctagtagtagcaaatcccctcctgtaaacggagctgtagacctccgg
tctcctaatgtgggacaagttctgaggactctgttgggagaaacgtgcgcaccacgatac
cctgccaggaacatccgagactcccatctgggccaggaccacagagagaatgactctctg
cttatggactgggccaacatgcaaccatcaatggatgcaagctttgaacaagccccctgg
agtgacctgcttatttgggctctgttgttgaaccgagcccagatggctatttatttctgg
gagaagggctccaactcagtggcctctgctcttggggcctgtctcttactccgagttatg
gctcgattagagtgggaggctgaggaggccgcgcggcggaaggaccttgctgccacgttt
gaaagcatgagtgtggacctctttggagagtgttaccacaacagtgaagagcgagcagcc
cgccttcttctacgccggtgtcccctctggggagaggccacctgcctccagcttgccatg
caggctgatgcccgagcattctttgcccaggatggagtccagtctctgctgacacagaag
tggtggggagagatggacagcacgacccccatctgggccctgcttctcgccttcttctgc
ccgcctctcatctataccaacctcatcgtcttcaggaagtcagaggaggagcccacactg
aaggaccttgactctgatatggacagcagcatcaacggagcaggtcctcctgggcctgca
gagacatcggcaaaggtggcccttgagaggcgaaggcagcggaggccaggacatgccctc
tgctgtggcgggttctccaagcgctggtcgcacttctggggcgccccagtgaccgccttc
ctgggtaacgtgctcagttacctgctgttcctgctgctgtttgcacacgtgttgctggtg
gatttccagccctcagagccgggtgtcttcgagctgctgctgtacttctgggccttcacg
ctgctgtgcgaggagctgcgccagggcctgggcggtggctggggtagcctggccagcggg
ggacctggtcccggccaagctcccctgcgccataggctgcacctctacctctcagatacc
tggaaccagtgcgacctgctggcactcacgtgcttcctgctgggcgtaggctgcaggctg
acccctgggctgtttgagttgggacgcaccgtcctctgccttgacttcatgatcttcaca
ctgcgcctgctgcacatcttcaccgtgaacaagcagctggggcccaagattgtcatcgtg
agcaagatgatgaaggatgtattcttcttcctcttcttcctctgcgtgtggcttgtagcg
tatggagtagccacagaggggatcctgaggccccaggaccgcagtctaccgagtatcctg
cgcagggtcttctaccgtccatatctgcagatcttcggacaaattccccaggaggaaatg
gatgtggccctcatgattccaggtaactgctctatggagcggggctcctgggctcacccg
gaggggcccgtcgcaggctcctgtgtgtcccagtacgccaactggctggtggtgttgctc
ctcatcgtcttcttgctggtggccaatatcctgctgctcaatcttctcatcgccatgttc
agctacaccttcaacaaagtgcacggcaacagcgacctctactggaaggcacagcgctac
agcctcatccgggaattccattcgcggcctgccctggccccaccactcatcatcatctct
cacgtgcgcctcctcatcaagtggctgcgcaggtgcaggtgtcgtagggctaacttgcca
gcctccccagtcttcgnnnnnnnnnnatttggtgtctgtctctctaaggaagctgagcgg
aagctgctgacttgggagtctgtgcacaaagagaacttcctgttggcacaagctcgtgac
aagcgagacagtgactcggagcggctgaaacgcacgtctcagaaggtggacactgccctg
aagcagctgggacagatcagagagtatgatcggcgcctgagggggctggagagagaggtc
caacactgttctcgagtcctgacttggatggctgaggccctaagccactctgccttgctg
cctccagggggaccaccccctccaaccccccctgggtccaaaggttatagtccgtcagtg
agggaagcagggagagagcacggaccttctcaccctataaccagaaagctcacagccaaa
gacatgcaccagaagccacagaacaacgctgttcgctggaccacagctccttccattcag
gcagcttcagcatacagttcaggattcctcaccccaggaaataggattgtccacagtggg
ctgggccttcctacccacttggcaatagagataatccctcacagacatgcccacaggtca
atttga
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