Mastomys coucha (southern multimammate mouse): 116103333
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Entry
116103333 CDS
T07224
Symbol
Kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116103333 (Kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116103333 (Kdm2a)
04121 Ubiquitin system [BR:
mcoc04121
]
116103333 (Kdm2a)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116103333 (Kdm2a)
Enzymes [BR:
mcoc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
116103333 (Kdm2a)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116103333 (Kdm2a)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116103333 (Kdm2a)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
116103333 (Kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
116103333 (Kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
116103333
NCBI-ProteinID:
XP_031245036
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MLLLPFPAPSERRGVGEAKPVRCTERSPPHPRAEGGQALQRGRRGLLRDGEQRGTMRRRY
EDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGKDFNVEYIQRGGLRDPLIFKNSD
GLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETPEEEREKLYN
VISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLM
SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQGDIFLGDRV
SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYSIEDRTRVPN
KFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLSMDMELNELESGNGDEEGVDREA
RRMNSKRSVLTSPVANGVNLDYDGLGKACRSLPSLKKTLSGDSSSDSSRGSHNGQVWDPQ
CSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKILLEELASS
DPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKPHTMKPAPRLTPVRPAAASPIVS
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSL
CGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDSSE
KAQKRKIEESDEEAVQAKVLRPLRSCEEPLTPPPHSPTSMLQLIHDPVSPRGMVTRSSPG
AGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKIRGSYLTVT
LQRPTKELHGTSIVPKLQAITASSANLRPNPRVLMQHCPARNPQRGDEEGLGGEEEEEEE
EEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMSVFRYLSRRELCECMRVCKTWYKW
CCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLL
LAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPGQDNRSKLRNMTD
FRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAG
CNKLTDQTLFFLRRIANVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgctactactaccgtttcctgccccttcggagcgccgaggagtgggtgaggccaaaccg
gttcgctgcacagagaggagccctccccacccccgtgccgagggcggccaggccctgcag
cgggggcgcaggggcctactccgggatggcgagcagcgtggtaccatgcgacgtcgctat
gaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttggaagag
aagctccatactaacaaatataatgctaattttgttacttttatggagggaaaagatttt
aatgtagagtatatccagcggggtggcttgagagaccctctcattttcaagaattctgat
ggacttggaataaagatgccggatccagacttcacagtgaatgatgtcaaaatgtgtgtg
gggagtcgtcggatggtggatgtcatggatgtgaacacacagaaggggattgaaatgacc
atggcacagtggacacgatactatgagactccagaggaagagcgagaaaaactctataat
gttatcagcctagagtttagccacaccaggcttgagaatatggtgcagcggccttccacg
gtggatttcattgactgggtagataacatgtggccaaggcacttgaaagaaagtcagact
gaatcaacaaatgccatcttagagatgcagtaccctaaagtgcaaaagtattgtctgatg
agtgttcgaggctgctatactgacttccatgtggattttggaggtacttctgtttggtac
cacatccaccaaggtggaaaggtcttctggctcatcccccctacagcccacaacctggag
ctgtacgagaattggctgctatcagggaaacagggagacatctttctgggtgaccgggtg
tcagattgccaacgaattgagctcaagcagggctataccttcgttattccctcaggttgg
attcatgctgtgtatactcctacagacacattagtgtttggaggcaattttttgcatagc
ttcaacatccccatgcaattaaagatatatagcattgaagatcgaacacgggttccaaat
aaattccgttacccattttactatgaaatgtgttggtatgtgttggagcgctatgtatac
tgcataaccaaccgatcccacctaactaaggaatttcagaaagaatcccttagcatggat
atggaattaaatgagttggagtctggaaatggtgatgaggaaggggtggacagagaagcc
cgacgcatgaacagtaagcgatctgtgcttaccagccctgttgctaatggagtcaacttg
gattatgatggacttggcaaagcctgccgaagtcttccaagtctgaagaaaactttgtct
ggagactcctcctcagactctagccggggatcccacaatggccaagtgtgggatccccag
tgtagcccgagaaaggataggcaagtgcatctgacccactttgaacttgaaggtcttcga
tgtcttgtagataagttagagtcactgccactgcacaagaaatgtgtccccacagggata
gaagacgaagatgctctgattgctgatgtaaagattttgctggaagaacttgccagtagt
gatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggataagctt
aaattccctaccaggccaaaggtaagggttcctacaattcccatcacaaagcctcacacc
atgaaaccagctccacgcttaacacctgtaaggcctgctgcagcctcccccattgtgtca
ggagccaggcggagaagagttcggtgtaggaagtgcaaagcatgtgtgcaaggagaatgt
ggagtctgccactactgcagggacatgaagaaatttggtggacctggacgcatgaagcag
tcttgtgtcctccgacagtgcttagcacccagactgcctcattcagttacgtgttctctc
tgtggagaagtagatcagaatgaagagacacaggactttgaaaaaaaactcatggaatgc
tgcatctgcaacgaaatagttcatcctggctgcctccagatggatggagaggggttgctt
aacgaggaattgccaaattgctgggagtgtccaaagtgttaccaggaagacagctcggaa
aaagcccagaagcggaaaatagaagagagtgatgaagaagctgtccaagccaaagtccta
cggcccctgcggagctgcgaggagcccctcacacccccacctcactcacctacttccatg
ctgcagctcatccacgacccggtttctccccggggtatggtgactcggtcatcccctggg
gctggccccagcgaccaccacagtgccagccgtgatgaacgcttcaaacggcggcagttg
ctgcggctacaagccacagagcgcaccatggtacgggaaaaggagaacaatcccagcggc
aaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcactgtcacg
ctacagaggcccaccaaagagctccacgggacatccattgtacccaagctgcaggccatc
acggcctcctctgccaaccttcgccctaacccccgggtgctaatgcagcactgcccagcc
cgaaacccccagcgtggggatgaggaggggcttgggggagaggaggaggaagaggaggag
gaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggccggggcagt
tgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtctgtcttccgc
tacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacatggtataaatgg
tgctgtgataaacgactttggacaaaaattgacttgagtaggtgtaaggccatcgtacca
caagctctcagtggtatcatcaagcggcagccagtaagcctcgacctcagttggactaac
atctccaaaaagcagctgacatggctggtcaataggctgccaggattaaaagacctcctc
ctagcaggctgttcctggtctgcagtatctgccctcagcacctccagctgcccccttctc
aggacccttgatcttcggtgggcagtgggaattaaagaccctcaaattcgggacttgctg
actccacccacagataagccaggtcaagacaatcgaagcaaactccggaacatgactgac
ttccgactggcaggccttgacatcacagatgccactctccgactcatcattcgccacatg
ccccttttgtctcgacttgacctcagtcactgcagccaccttacagatcagtcctccaac
ctactaactgctgtcgggtcttccactcgatactcccttacagagctcaatatggcaggt
tgcaataaattgacagaccagaccctgttcttcctaaggcgaattgctaatgtcaccttg
attgaccttcgaggatgcaagcagatcacaaggaaagcctgtgagcacttcatctcagac
ttatccatcaacagcctctactgcctgtctgatgagaagctgatacagaagattagctaa
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integrated database retrieval system
