Mastomys coucha (southern multimammate mouse): 116103831
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Entry
116103831 CDS
T07224
Symbol
Slit1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116103831 (Slit1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116103831 (Slit1)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116103831 (Slit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_9
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
LRR_EndoS
EGF_3
EGF_2
EGF_Teneurin
FNIP
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
116103831
NCBI-ProteinID:
XP_031246177
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MALTPQRGSSSGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RNTERLELNGNNITRIHKNDFSGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQ
LQVLPELLFQNNQALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAARAPACTLSSGSCPAMCSCSSGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEAGVVECSGLKLSKIPERIPQ
STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQ
LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL
QALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE
EGQEDVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPPEME
GKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCLNQGTCHNDPLEVYRCTCPSGYKGRS
CEVSLDGCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGPTCGVNTDDCVKHACVNGGVC
VDGMGNYTCRCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTPDGPRCECMPGYIGDNC
SENQDDCKDHQCQNGAQCVDEVNSYACLCAGGYSGQLCEIPPAPRSSCEGTECQNGANCV
DQGNRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL
LYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSID
GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL
QDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPVDGPCHG
HKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATKGAHCV
CSPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGACPGQGCCQGLRL
KRRKLTFECSDGTSFAEEVEKPTKCGCTPCA
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacgccccagcgcgggtcgtcctcggggttgagccgaccggagctgtggctg
ctgctgtgggcagccgcgtggcgcctgggggccacggcgtgccccgccctctgcacctgc
accggcaccacggtggactgccacggcacgggtttgcaggccatccccaagaacatccca
cggaacaccgagcgcctggagctcaacggcaacaacatcactcggatccacaagaatgac
ttttctgggctcaagcagctgcgagtgctgcagctgatggagaaccagattggagctgtg
gaacgaggagcttttgatgacatgaaggagctggagcggctacgactgaaccgcaaccag
ctgcaagtgttgcctgaactactgttccagaacaaccaggctctatccagactggacctg
agtgagaattctctccaggctgtgcccaggaaggctttccggggagccacagacctcaaa
aatctacagctggacaagaaccagatcagctgcatcgaagaaggggccttccgtgccctc
cgagggctcgaggttctgaccctgaacaacaacaacatcaccaccattcccgtgtccagt
ttcaaccatatgcccaagcttcggaccttccgactgcactccaaccacctgttctgtgac
tgtcacctggcctggctctcgcagtggctgagacagagacccaccatcgggctcttcacc
cagtgctccgggcccgccagccttcggggcctcaatgtggcagaggtgcaaaagagcgag
ttcagctgctcaggccagggggaggctgcgcgagcacctgcctgcaccctctcttccggt
tcctgcccagccatgtgtagctgtagcagtggcatcgtggactgccgcggcaaaggcctc
actgccatccccgctaaccttcctgagaccatgacggagatccgcctggagctgaatggt
atcaaatccatcccaccaggagccttctctccctacagaaagctgcgcaggatagacctg
agcaacaaccagattgcagagatcgcacctgacgccttccaaggcctgcgctccttgaat
tccctggtcctctatggtaacaagattacagacctgccccggggtgtatttggaggcctg
tacacactccagctgctgcttctgaatgccaacaagatcaactgcatccggcccgatgcc
ttccaggacctgcaaaacctctccctgctctccctgtatgacaacaagatccagagtctc
gccaagggcaccttcacctccctgcgggccatccagacactgcatctggcccagaaccct
ttcatctgtgactgtaacctcaagtggctggcggacttcttacgtaccaaccccatcgag
acaactggggcccgctgtgccagcccccggcgccttgccaacaagcgtatcgggcagatc
aaaagcaagaagttccggtgctccgccaaagagcagtacttcattccagggacagaggat
taccacctgaacagcgagtgtaccagtgacgtggcctgcccccacaagtgccggtgtgag
gccggtgtggtggagtgctcaggcctgaagctctctaagatccctgagagaatcccccag
tccacgactgagctacgactgaacaacaatgagatttctatcctagaggccactgggttg
tttaagaaactctcacatctgaagaaaataaacctgagcaataacaaggtgtccgagatc
gaagacgggacgtttgaaggtgccgcctctgtcagcgagctgcacctgacggccaaccag
ctggagtccatcagaagtggcatgttccggggtctagatggcttacgaaccctgatgctg
aggaacaaccggatcagctgcatccacaatgacagcttcaccgggctgcgcaatgtgcgg
ctcctgtctctttatgacaaccacatcaccaccatctcccctggagcctttgacactctc
caggccctgtccacactgaacctcctggccaacccattcaactgcaactgccatctgtca
tggctgggtgactggcttcggaagaggaagatcgtgacagggaaccctcgctgtcagaac
ccagacttcctgcggcagattcctctgcaagatgtggccttccctgacttcaggtgtgag
gaaggccaggaggacgtgggctgcttgccccgcccacagtgcccccaggagtgcgcctgc
ctggacaccgtggtccgctgcagcaacaagcacctccaggctctgcccaagggcatcccc
aagaacgtcacagaactctatttggatgggaaccagttcacattggttccaggacagctg
tctaccttcaagtatctgcaacttgtggacttgagcaacaacaagatcagttccttaagc
aattcttccttcaccaacatgagccagctgaccacactgatcctcagttacaacgccctg
cagtgcatccctcctctggccttccaaggacttcgttcgctgcgcctgctgtctttgcac
ggcaatgatgtctccaccctccaagagggcatcttcgcagacgtgacatctctgtctcac
ctggccattggtgccaaccccctgtactgcgactgccacctccgatggctctccagctgg
gtgaagactggctacaaggaacctggcattgcccgatgtgctggacccccagagatggag
ggcaaactgttgctcaccacacctgccaagaagtttgaatgccaaggtccccccagtctg
gcagttcaggccaagtgtgatccctgcttgtccagcccatgcctgaatcagggcacctgc
cacaatgacccacttgaggtatacaggtgtacctgccccagtggctacaagggccgaagc
tgtgaggtgtctctggatggctgttccagcaacccatgtggaaatggggggacctgccat
gcccaggagggcgaggatgcaggcttcacgtgctcctgtccctccggctttgaggggccc
acctgtggggtaaacacagatgactgtgtaaagcacgcctgtgtcaatggaggtgtctgt
gtggatggcatggggaattacacatgtcggtgccccctgcagtacacaggaagggcctgt
gagcagctggtggacttctgctccccggatctgaacccgtgtcagcatgaggcccaatgt
gttggcaccccggatgggcccaggtgtgagtgtatgccaggttacataggtgacaactgc
agtgaaaatcaggatgactgcaaggaccaccagtgtcagaatggagcccagtgtgtggat
gaagtcaacagctatgcctgcctctgtgctgggggctacagcggacagctctgtgagatc
ccacctgcccccaggagctcctgtgaggggacagagtgccagaatggagccaactgcgta
gaccagggcaaccggcccgtatgccagtgcctgccaggctttggtggccctgaatgtgag
aaattgctcagtgtcaactttgtggaccgggacacttatctgcagttcactgacctgcag
aactggcctcgggccaacatcactcttcaggtctctacagcagaggacaatgggattctc
ctctacaatggggataatgaccacattgcagttgagctgtaccagggccatgttcgtgtt
agctatgacccaggcagctaccccagctctgctatctacagtgctgaaacgatcaacgat
gggcagttccacactgttgagctggtcacctttgaccagatggttaacctctcgatcgat
ggcggcagccccatgaccatggacaactttggcaagcactacacgctcaacagcgaggcc
cccctctatgtgggagggatgcccgtggatgtgaactcagctgccttccgcctgtggcag
atcctcaatggcaccagcttccatggttgcatccggaacctatacatcaacaacgaactg
caggatttcaccaagacacagatgaagccaggcgtggtgccaggctgtgagccttgccgc
aagctctactgtctacatggcatctgtcagcccaatgccaccccagggcctgtgtgccac
tgtgaggctggctgggggggcctgcactgtgaccagccagtggatggcccctgccatggc
cacaagtgtgtccatgggaaatgcgtgcccctcgatgctcttgcctacagctgccagtgc
caggatggttactcgggggctctgtgcaaccaggtcggggctgtggcagagccctgtggg
ggcttgcagtgcctgcatggtcactgccaggcctcggccaccaaaggggcacactgtgtg
tgcagcccaggcttttcaggcgagctgtgtgagcaagagtccgagtgccggggggaccct
gtccgggactttcaccgggtccagaggggctatgccatctgccagaccacgcgcccgctg
tcgtgggtggaatgccggggcgcgtgcccaggccaggggtgctgccagggcctgcggctg
aagcggaggaagctcaccttcgagtgcagcgatgggacctcgtttgccgaggaggtggag
aagcccaccaagtgcggctgcaccccctgcgcataa
DBGET
integrated database retrieval system
