Mycobacterium cookii: MCOO_28290
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Entry
MCOO_28290 CDS
T07035
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCOO_28290 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_28290 (nth)
Enzymes [BR:
mcoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCOO_28290 (nth)
DNA repair and recombination proteins [BR:
mcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCOO_28290 (nth)
Prokaryotic type
MCOO_28290 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBX46814
UniProt:
A0A7I7KYD2
LinkDB
All DBs
Position
complement(3000388..3001179)
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AA seq
263 aa
AA seq
DB search
MGKPSRAAAKAVGGDGGAAARRWASETPLGLVRRARRMNRKLAEAFPHVYCELDFTSPLE
LAVATILSAQSTDKRVNLTTPALFARYHSAVDYARADREELETLIRPTGFYRNKASSLIG
LGQALVERFDGEVPRTMDELVTLPGVGRKTANVILGNAFDIPGITVDTHFGRLVRRWRWT
AEEDPVKVEHAVGELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCPSFGTGPT
EPLIAAALVQGPETEHLLAMAGL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaccttcccgcgctgccgccaaggccgtcggcggggacggcggcgctgcggcc
cggcgttgggcctcggagactccgctgggtctggtgcgccgcgctcgccgcatgaatcgc
aaactggcagaagcgtttccgcatgtctactgcgagttggatttcacctcaccgctggag
ttggcggtggccacgatcttgtcggcgcaaagcaccgacaaacgggtaaatctcaccacc
ccggcccttttcgcccgttaccactcagccgtggactatgcgcgggccgaccgcgaagaa
ctcgaaacgcttattcgcccgaccggtttctatcgcaataaagcgtcctcattgatcggc
ctcggtcaggcattggtcgagcgtttcgacggcgaagtgccgcgcaccatggacgaactc
gtcacgctgcccggcgtgggccgcaagaccgccaacgtcattctgggcaatgcgttcgac
atcccgggaatcaccgtcgacacccacttcggccggctggttcggcgctggcgttggacg
gccgaggaggaccccgtcaaggtcgagcacgccgtcggcgaactcatcgagcgcagcgaa
tggaccttgctcagccaccgggtgatcttccacggccgcagggtgtgccacgcccgcaaa
ccggcgtgcggggtgtgcgtgttggccaaggactgcccgtcgttcgggaccggccctact
gagccattgatcgccgcggcgttggtgcagggcccggaaaccgaacaccttctggcgatg
gccggcttgtag
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