Maribellus comscasis: GM418_25215
Help
Entry
GM418_25215 CDS
T07297
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcos
Maribellus comscasis
Pathway
mcos03030
DNA replication
mcos03410
Base excision repair
mcos03420
Nucleotide excision repair
mcos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM418_25215 (ligA)
03410 Base excision repair
GM418_25215 (ligA)
03420 Nucleotide excision repair
GM418_25215 (ligA)
03430 Mismatch repair
GM418_25215 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcos03032
]
GM418_25215 (ligA)
03400 DNA repair and recombination proteins [BR:
mcos03400
]
GM418_25215 (ligA)
Enzymes [BR:
mcos01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GM418_25215 (ligA)
DNA replication proteins [BR:
mcos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GM418_25215 (ligA)
DNA repair and recombination proteins [BR:
mcos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GM418_25215 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM418_25215 (ligA)
MMR (mismatch excision repair)
DNA ligase
GM418_25215 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GM418_25215 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
RNA_pol_A_CTD
HHH
DUF5960
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QGY46837
UniProt:
A0A6I6K2U6
LinkDB
All DBs
Position
complement(6260347..6262353)
Genome browser
AA seq
668 aa
AA seq
DB search
MNREEAQKKIEQLREELEEHNYNYYVLNQPVISDFEFDMKMKELEKLEKDFPEFADLNSP
SQRVGSDINKEFEQVEHKYSMLSLSNAYSKEEIQDFDTRIKKIIETDYEYVCELKFDGSS
ISLLYENGWLTRAVTRGDGVRGDDVTNNVRTIRSVPLRLRGKGYPESFEIRGEILMPFHV
FEALNAEREKKGEPLLANPRNTAAGTLKMQNSSIVATRKLDAYFYYLLGENLPYDGHYEN
LQKTKEWGFKISDAMQKCASLKEVFDYLDKWDLERHHLPVATDGVVIKVNSKNLQDNLGF
TAKSPRWAIAYKFKAESASTILKSVSYQVGRTGAVTPVANLEPVLIAGTMVKRASLHNAD
IIQNLDLHINDTVFVEKGGEIIPKITGVDQSKRHPMFQSVIFIESCPECGTKLVRNEGEA
AHYCLNEVGCPPQIKGKIEHFVSRKAMDIDGLGQETIELLYNQKLIHGIADLYRLKKEQL
VGLERMGDKSAERILNSLEESKNVPFERVLFSLGIRFVGETVAKTLAKNMHTIEKIQSAG
YEDLIEIDEIGGKIAESIVDWFSKTEYRELIDFLKEKGLQFSISEKELNNKTEKLKGLSI
IISGTFEKFSRDELKNMIEQNGGKNVGSISKKTNYLIAGENMGPSKLEKATKLGVPIISE
NDFLKMIE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggaagaagctcaaaaaaagatagaacagctacgcgaagaacttgaagaacac
aactacaactattatgttttaaaccaaccggttatatcggattttgagtttgatatgaaa
atgaaagaactggaaaaactggaaaaagactttcctgaatttgcagatctcaattcccct
tctcagcgtgtaggaagtgatatcaacaaagaatttgaacaggtggaacataaatattcc
atgctttcgctttccaatgcgtattccaaagaagaaattcaagactttgatacccggata
aaaaagataattgaaaccgattatgaatatgtttgtgaattaaaatttgacggatcttcc
attagtttactttacgaaaacggatggctgacaagggcagttacacgaggcgacggcgtt
cgcggagatgatgtcacaaacaatgttcgtaccattcgttctgtaccgctaaggttgcgt
ggtaaaggttacccggaaagttttgaaatcaggggtgaaatattaatgccttttcatgtt
tttgaagcgttaaatgccgagcgcgaaaaaaaaggagagccgcttttggctaacccgaga
aacacagctgccggaacactaaaaatgcagaattcatcgattgttgcaacccgtaaactg
gatgcctatttttattatttactgggcgaaaatttgccatacgacggtcattatgaaaac
ctgcaaaagaccaaagaatggggtttcaaaatttcggatgcgatgcaaaaatgcgcatcg
ctcaaagaagtttttgactatctggataaatgggatttggaacgccatcatcttccggtt
gccaccgatggcgtcgtaattaaagtaaattcgaaaaacttacaggataaccttggattt
accgcaaaatcgccacgctgggccattgcatataagtttaaggcggaaagtgcttccacc
attttaaaatcggtttcctaccaggttggcagaacgggtgcagttactcctgtggcaaat
cttgagcccgttttaattgccggaacaatggtgaaacgtgcttcgcttcacaatgccgac
atcatccaaaaccttgatctccatattaacgatacggtttttgtggaaaaaggaggagaa
attatccctaaaattaccggggttgatcagagtaaacgtcatccgatgtttcaatcagtg
atatttattgaaagctgcccggaatgtggcacaaaactggttagaaatgaaggagaagca
gcgcattattgtctgaacgaagttggctgcccgcctcagataaaagggaaaatagaacac
tttgtaagccgcaaggctatggacatcgacgggcttggacaggagaccatcgagctgttg
tacaatcaaaagttaattcatgggattgctgacttgtatcggctaaaaaaagagcaactg
gttggtttagaacgaatgggtgataaatcggcagagcgcattttaaatagccttgaagaa
tcaaaaaatgtcccttttgaacgtgtattgttttcgctgggaatccgttttgtaggtgaa
accgttgccaaaacactggctaaaaatatgcacaccattgaaaaaattcaaagtgcaggt
tatgaagatctcattgaaattgacgaaattggaggaaaaatcgccgaaagtattgtcgat
tggttttccaaaacagaataccgggaactaattgattttctgaaagaaaaaggtctgcaa
ttttccattagcgaaaaagagctaaacaacaaaacggaaaaactaaaagggctaagtatt
attatttccggaacttttgaaaaattctcccgcgatgaattaaaaaatatgatcgaacaa
aacggcggtaaaaatgtaggttccatttcaaaaaaaaccaactatctgattgccggtgaa
aatatggggccaagcaagctggaaaaagccacaaaacttggagttcccattatttcggaa
aatgattttttaaaaatgatagaataa
DBGET
integrated database retrieval system
