Mycoplasma cottewii: NX779_00830
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Entry
NX779_00830 CDS
T08501
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcot
Mycoplasma cottewii
Pathway
mcot03030
DNA replication
mcot03410
Base excision repair
mcot03420
Nucleotide excision repair
mcot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NX779_00830 (ligA)
03410 Base excision repair
NX779_00830 (ligA)
03420 Nucleotide excision repair
NX779_00830 (ligA)
03430 Mismatch repair
NX779_00830 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcot03032
]
NX779_00830 (ligA)
03400 DNA repair and recombination proteins [BR:
mcot03400
]
NX779_00830 (ligA)
Enzymes [BR:
mcot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NX779_00830 (ligA)
DNA replication proteins [BR:
mcot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NX779_00830 (ligA)
DNA repair and recombination proteins [BR:
mcot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NX779_00830 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NX779_00830 (ligA)
MMR (mismatch excision repair)
DNA ligase
NX779_00830 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NX779_00830 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
HHH
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
UWD35191
LinkDB
All DBs
Position
201819..203825
Genome browser
AA seq
668 aa
AA seq
DB search
MNKQEILIKINQLKEKIEKWSYEYYVLDNPSVDDSEYDLVLNELIDLEKQNPEFITPDSP
TQKVGGTIIQGFEKVNHKTPMLSLGNVFSFEEFKDFNNQISKVTNTIDNQYFAELKIDGL
SISLIYENGILTTAATRGDGVVGEDVTVNVKTIKSIPLKISKKTRVEVRGEVFLSKKEFE
KINNERLLKGEQLFANPRNAAAGTLRQLDSSIVAKRNLDAFLYYYLADDSDDLTQAESIE
KLKELGFKTNSEPMLCTNLDQVKNYIEKYTELKDDLDYQIDGIVFKLNDKKLQAKVGYTV
KAPKWAIAYKFPAEVKTTKLLDIFPTVGRTGKITYNAKLEPVQIMGTVVSAATLHNAEFI
KSKDLRVNCYVKIKKAGDIIPEVLEAVKDDNFYNLDKWIIDDRCPDCDSLLEKNTDEVDQ
FCINTSCPRQIVRCLQHFVSRNATNIVGLGDQLIETLFDNKILSNILDIYNLKNYKDEIL
QIEGFGQKKYDNLINSIELSKSSSFDKILFGLGIRHIGQKNAKVLAQNFKNIDNLKNASL
EQLTNIDSIGEVMAQSVVDWFKIDENIKLIEELKSIGIRFAYLDSQTNQESKIADKTFVI
TGTLSKNREYFKELIEKNLGKTTSSVTSKTDYLLAGENAGSKLEKANSLNVKVINEDEFY
KLIGNESE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaagagatattaataaaaattaatcaattaaaagaaaagatcgaaaagtga
tcttatgagtattatgttttagataatccttcagttgatgatagtgaatatgatcttgtt
ttaaacgaattgatcgatctagaaaaacaaaatcctgaatttattacaccagattcacct
actcaaaaagttggtggaactattattcaaggttttgaaaaagttaatcataaaactcct
atgctaagtttaggtaatgtttttagttttgaagaatttaaagattttaataatcaaata
agtaaagttacaaatacaattgataatcaatattttgctgaattaaaaatagatggttta
tcaatttcactaatttatgaaaatggaattttaacaacagcagcaacacgtggagatggt
gttgttggtgaagatgtaacggttaatgtaaaaactatcaaatcaatacctttaaaaatt
agtaaaaaaactagagttgaagttagaggagaagtttttttatctaaaaaagaatttgaa
aaaattaataacgaaagattattaaaaggtgaacaattatttgcaaatcctagaaatgca
gcagctggaactttaagacagctagattcatcaattgttgctaaaagaaatcttgatgca
tttttatactattatttagctgatgattcagatgatttaactcaagctgaatcaattgaa
aaattaaaagaattaggctttaaaacaaatagtgaaccaatgttgtgtactaatctagat
caagttaaaaattatattgaaaaatatactgaactaaaagatgatttagattatcaaatt
gatggaattgtttttaaattaaatgataaaaaattacaagctaaagtaggatatacagta
aaagcccctaaatgagcaatagcatataaatttccagcagaagtaaaaacaactaaacta
ttagatattttcccaacggttggtcgaacaggaaaaattacttataatgctaaacttgaa
ccagttcaaataatgggaacagttgtaagtgctgcaactttacataatgctgaatttatt
aagtcaaaagatttaagagttaattgttatgtaaaaataaaaaaagcaggagatattatt
cctgaagttttagaagcagttaaagatgataatttttataatttagataaatgaataatt
gatgatcgttgtcctgattgtgatagtttattagaaaaaaatactgatgaagttgatcaa
ttctgtattaatacttcttgtcctagacaaattgttagatgtttacaacactttgtaagc
cgaaacgcaacaaacattgtaggattaggtgatcaattaattgaaactttatttgataat
aagatactttcaaatatcttagatatttataatttaaaaaactataaagatgaaatttta
caaatagaaggatttggtcaaaaaaaatatgataatttaattaactctattgaattatct
aaaagctcatcttttgataaaatcttatttggattaggtataagacatataggtcaaaaa
aatgctaaagtattagctcaaaattttaaaaatattgataatttaaaaaacgctagttta
gaacaattaactaatattgattcaattggtgaagtaatggctcaatctgtagttgattga
tttaagattgatgaaaatataaaattaatagaagaacttaaatcgattggaattagattt
gcttatttagattcacaaactaatcaagaatcaaaaatagctgataaaacatttgttata
acaggaactttatctaaaaatagagaatactttaaagaattaatagaaaaaaatttagga
aaaactacttcatcagttacaagtaaaacagattatttactagctggtgaaaatgcagga
tctaaactagaaaaagctaatagtttaaatgttaaagttataaatgaagatgagttttat
aaactaataggaaatgagagtgaataa
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