Mangrovibacillus cuniculi: G8O30_00165
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Entry
G8O30_00165 CDS
T07913
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcui
Mangrovibacillus cuniculi
Pathway
mcui03030
DNA replication
mcui03410
Base excision repair
mcui03420
Nucleotide excision repair
mcui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8O30_00165 (ligA)
03410 Base excision repair
G8O30_00165 (ligA)
03420 Nucleotide excision repair
G8O30_00165 (ligA)
03430 Mismatch repair
G8O30_00165 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcui03032
]
G8O30_00165 (ligA)
03400 DNA repair and recombination proteins [BR:
mcui03400
]
G8O30_00165 (ligA)
Enzymes [BR:
mcui01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G8O30_00165 (ligA)
DNA replication proteins [BR:
mcui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G8O30_00165 (ligA)
DNA repair and recombination proteins [BR:
mcui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G8O30_00165 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G8O30_00165 (ligA)
MMR (mismatch excision repair)
DNA ligase
G8O30_00165 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G8O30_00165 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
RNA_pol_A_CTD
HHH
5_3_exonuc
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
QPC45500
UniProt:
A0A7S8HEK4
LinkDB
All DBs
Position
37999..40002
Genome browser
AA seq
667 aa
AA seq
DB search
MTNQAEQRVKELQNLLQQYDYDYHVLDKPAVSDAEYDQLLRELSKLEQEHPELVTPDSPT
QRVGGAVLDAFEKVTHETPMLSLGNAFNADDLRSFDQRVKQAVGENVRYVSELKIDGLAV
SLRYEDGQFVRGATRGDGTVGENITANLRTIKSIPLTLKEPVTLEVRGEAYMPKRSFDAL
NKQKEENGEELFANPRNAAAGSLRQLDTKIAASRNLSIYVYSIANQGDAPIDSHSGGLDY
LDTLGFKTNKERQTFDSMEDVIEFVEGWTDKRADLPYDIDGMVIKVDSLAHQEELGFTAK
SPRWAIAYKFPAEEVETTLLDIELSVGRTGVVTPTAILEPVRVAGTTVQRASLHNEDLIR
EKDLRIGDKVIIKKAGDIIPEVVNVLVEKRTGEEKEFTMPTNCPECESELVRLEEEVALR
CVNPACPAQIREGLIHFVSRTAMNIDGLGEKVITQLFQHELIKDVADLYKLQKEELLELD
RMGQKSVEKLLAAIEQSKENSLEKLLFGLGIRHVGAKAAKTLAEEFESIDQLMNATHADI
TAIHEIGDKMAESIVAYFQIEEAQQLIQRLKDHGVNVSYKGPKKVKVEDIDSVFAGKTVV
LTGKLEQLTRNEAKEKLEALGAKVTGSVSKSTDLLIAGEDAGSKLTKAESLGIEIWNENR
LVEELNK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcaagcggaacaacgagtgaaagaactgcaaaacctccttcaacagtatgac
tatgactatcatgtgttagataaacctgcagtatcagatgcagaatacgatcaattacta
cgagagctgtcaaagttagaacaagaacatccagagttagtcacaccagactcccctaca
caacgagttgggggagcggtgttggatgcttttgaaaaggttacacacgagacgcccatg
ttaagtttgggtaacgcatttaatgcagatgacttacgtagtttcgaccagcgtgtcaaa
caagcagtgggagaaaatgttcgatacgtgagtgagttgaagattgatggattagctgtt
tctcttcgctatgaagacggtcaatttgtcagaggagcaactcgtggtgatggaacggtt
ggggagaacattaccgctaacctacgaacaattaagtctatcccattaacgttaaaagag
cctgtgacgctagaagttcgcggtgaggcgtatatgcccaaacgatcttttgacgcttta
aataaacaaaaagaagaaaacggggaagagctgtttgcaaaccctcgtaatgctgctgcg
ggatcccttcgtcaattagataccaagattgcagcttcccgtaatctatccatttatgtc
tattccattgcaaaccaaggagacgcgccaatcgattctcattctggtggtcttgattat
ttagatacgctaggttttaagacaaataaagagcgacaaacgtttgactctatggaggat
gtcattgaatttgtagagggctggacggataaacgtgcagaccttccttacgatattgac
ggcatggtgattaaagtggactctttagcgcatcaagaagagttaggattcacagccaaa
agtccacgttgggctattgcctataagttcccagcggaagaggtagaaacgactttactg
gatattgaacttagcgttggcagaacgggtgtcgtaaccccaactgctattttagaacca
gttcgagtagcgggaactactgtacagcgagcttctttacataatgaagatcttattcgc
gaaaaggatttgcgaattggtgataaagtgattattaaaaaagctggggacatcattcca
gaagtagtaaatgtactggttgaaaagcgaactggggaagaaaaagaattcactatgcca
acgaattgtccagagtgcgaaagtgaactcgtaagattagaagaagaagtagcactgagg
tgtgtaaatcctgcctgtccagctcaaataagagaaggattgatacactttgtttccagg
actgctatgaatatcgatggcttgggtgaaaaagtcattacgcaattgttccaacatgaa
cttattaaagacgtagcggatctttacaagttacaaaaagaagagctactagaattagat
cgcatggggcaaaaatctgttgagaaattgttagctgcaattgaacaatcaaaagagaat
tcactcgagaaattattatttggacttggtattcgtcatgtaggagcaaaggcagccaaa
acacttgcagaagagtttgagagcatcgatcaattaatgaacgccacgcatgcagatatt
acggctatccacgaaattggagacaagatggctgagtccatcgttgcttatttccaaatc
gaagaagcacaacaattgatccaaagattaaaagaccatggagtaaacgtatcctacaaa
ggaccgaaaaaggtaaaagtagaagatatcgactcagttttcgctggtaaaacggttgtg
ttaacaggtaaactagaacagttgacacgaaatgaagcaaaagaaaaattagaggcattg
ggtgcaaaagtaaccggaagtgtgagtaagagtacagatttacttattgcaggagaagat
gctggttcgaagttgacgaaggcagaaagtttaggaattgagatctggaatgaaaatcgc
cttgtagaggaattaaataagtaa
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