Moraxella cuniculi: NCTC10297_00695
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Entry
NCTC10297_00695 CDS
T06646
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mcun
Moraxella cuniculi
Pathway
mcun03030
DNA replication
mcun03410
Base excision repair
mcun03420
Nucleotide excision repair
mcun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10297_00695 (ligA)
03410 Base excision repair
NCTC10297_00695 (ligA)
03420 Nucleotide excision repair
NCTC10297_00695 (ligA)
03430 Mismatch repair
NCTC10297_00695 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcun03032
]
NCTC10297_00695 (ligA)
03400 DNA repair and recombination proteins [BR:
mcun03400
]
NCTC10297_00695 (ligA)
Enzymes [BR:
mcun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10297_00695 (ligA)
DNA replication proteins [BR:
mcun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10297_00695 (ligA)
DNA repair and recombination proteins [BR:
mcun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10297_00695 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10297_00695 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC10297_00695 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10297_00695 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
5_3_exonuc
RNA_ligase
SDE2_2C
Motif
Other DBs
NCBI-ProteinID:
VEG12761
UniProt:
A0A448GVG3
LinkDB
All DBs
Position
1:732716..734773
Genome browser
AA seq
685 aa
AA seq
DB search
MTDQNFSLTTNEPTTDAAIIEQMRALIDLLKKHNHAYYVMDAPTITDGEYDKLREQLMAL
ETTHPALVQSDSPIQTVGGEPLPFFTQVAHDVPMLSLGNVFDKTDLANFLRRANERAGVH
IDEYEMELKLDGLAVSLKYHHGRFVQAVTRGDGRVGEDITHNVRTIANLPQVLAGCEQLE
WLEVRGEVLMPKAGFERLNRDSLARGEKTFANPRNAAAGSLRQLNPAIAAARPLAFFAYS
VNQGLPDGIKTQSAALQWLGELGFQTAPFATATTLDGIEDYYHQIIKTRSSLPFEIDGLV
VKVNSLSLQEKLGFLSREPRWATAYKFPAEIVPTRLIHVEWQVGRTGTLTPVGKLEPVNV
GGVMVSNVTLHNFGEIGRLGIKIGDMVNVHRAGDVIPKVSGVIVELRPSDAKDITLPTHC
PVCSSPVALPEGEALARCTGGLYCAAQQQEALIHFVARRAMDIDGLGGQWLVKFWQMGLI
KTVADIYQLHQHKEHLMTLEGLGEKSVANMLTAIEKSKSTTLPRFIFALGIRGVGESTAQ
ALASQFGTLQAICDATLAQLQAVPDIGEITAQSIYDFFRAKHNMAVVQALIDAGVHWATM
TAPDSDSLPLTGETWVITGTLHQMGRDEAKDKLMALGAKVAGSVSAKTTRLLAGEKAGSK
LDKAMALGIAVVSEEQFLALLNDYS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaaaatttctccttgacgaccaacgagccaacgaccgatgcagcaatcatt
gagcaaatgcgcgctttgattgatttgctcaaaaaacacaaccatgcgtattatgtgatg
gatgcaccgaccatcaccgatggcgagtatgataagttgcgtgagcagctgatggcactt
gagacgacgcacccagcattggtgcagtcagacagtccgattcagacggttggtggagag
ccgttgccgttttttactcaggtggcacacgatgtaccgatgttgtcgcttggcaatgtc
tttgacaaaacggatttggcgaattttttgcggcgagccaatgagcgtgctggtgtccat
attgatgagtatgagatggagctaaaacttgatggtttggcggtttcgctgaaatatcat
catggcaggtttgtgcaagcggtaacgcgtggcgatgggcgagtgggcgaggatattacg
cacaatgtcagaaccattgccaatttgccacaagttttggcggggtgtgagcagcttgag
tggctggaggttcgtggcgaggtattgatgccaaaggcagggtttgagaggcttaatcga
gacagtctggctcgtggcgagaaaacttttgccaacccaagaaacgcagcagcaggttca
ttgcgtcagctcaatcctgccattgctgccgcacgaccgctggctttttttgcctattcg
gtcaatcaagggctgccagatggcatcaagacacaatcggcggctttgcagtggttgggc
gaactgggctttcagactgcaccttttgcaactgcgaccactcttgatggcattgaggat
tattatcatcagattatcaaaacacgcagcagcttgccgtttgagattgatggcttggtt
gttaaggttaattcactgtcattgcaggaaaaactgggttttttgagccgagaacctcgc
tgggctacggcgtataaattccctgccgagattgtgccaacacgactgattcatgttgaa
tggcaggttggacgcacaggcacattgacacctgtgggcaaacttgagcctgtcaatgtc
ggtggcgtaatggtgagcaatgttactttgcacaattttggcgaaattggacggctgggg
atcaaaattggcgatatggtcaatgtccatcgggcaggagatgttattcccaaagtgtca
ggcgtgattgttgagttgcgaccaagcgatgccaaagacattaccctgccgacacactgt
cctgtttgtagctcacctgtggctttgcctgagggtgaggcattggctcgttgcacaggt
gggctgtattgtgccgctcagcagcaggaggctttgattcattttgtggcacgccgtgcg
atggatattgacggtttgggcggtcagtggctggtgaaattttggcaaatggggctgatt
aaaaccgtggcggatatttatcagctgcatcagcacaaagagcatctgatgacgcttgag
ggtttgggcgaaaaatcagttgccaatatgctcaccgccatcgaaaaatccaaaagcacc
actttgcctcgttttatttttgcactgggcattcgtggcgtgggcgagagtacagcacag
gcactggcaagccaattcggcactttgcaggcaatttgtgatgctacattggcacagttg
caagcagtgcctgatattggcgaaattaccgcacagtcaatttatgattttttccgtgct
aagcacaacatggcagtggtgcaggcattgattgatgctggcgttcattgggcgacgatg
acagctcctgatagcgatagtttgccactgactggcgagacttgggtgataacaggtacg
ctacatcagatggggcgtgatgaggcaaaagataagctgatggcattgggggcaaaggtt
gctggcagtgtttctgccaagaccacacgcttgctggctggcgaaaaagcaggcagtaaa
cttgacaaagcgatggcattgggcattgctgtggtatccgaagagcaatttttggcattg
cttaatgattatagctaa
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