Mongoliitalea daihaiensis: IPZ59_11755
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Entry
IPZ59_11755 CDS
T07844
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mda
Mongoliitalea daihaiensis
Pathway
mda03030
DNA replication
mda03410
Base excision repair
mda03420
Nucleotide excision repair
mda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IPZ59_11755 (ligA)
03410 Base excision repair
IPZ59_11755 (ligA)
03420 Nucleotide excision repair
IPZ59_11755 (ligA)
03430 Mismatch repair
IPZ59_11755 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mda03032
]
IPZ59_11755 (ligA)
03400 DNA repair and recombination proteins [BR:
mda03400
]
IPZ59_11755 (ligA)
Enzymes [BR:
mda01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
IPZ59_11755 (ligA)
DNA replication proteins [BR:
mda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IPZ59_11755 (ligA)
DNA repair and recombination proteins [BR:
mda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
IPZ59_11755 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPZ59_11755 (ligA)
MMR (mismatch excision repair)
DNA ligase
IPZ59_11755 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IPZ59_11755 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
BRCT_2
PTCB-BRCT
Auto_anti-p27
5_3_exonuc
TcdB_N
Motif
Other DBs
NCBI-ProteinID:
UJP63518
LinkDB
All DBs
Position
complement(2788070..2790523)
Genome browser
AA seq
817 aa
AA seq
DB search
MTSQEAQLRISELSNQINYHNQLYYNEDRSEISDFEFDQLLQELITLETQFPEFLDADSP
SQRVGGTITKEFETVEHEYRMLSLGNTYSPEELLAFDERVAKGLGHRNYEYFCELKFDGV
AISLVYENGRLIRAVTRGDGTKGDVVTENIKTIRNIPLHIKGDKVPEKFEVRGEIFLPRK
EFDKINAEREANGEALLANPRNAASGTVKMQDSSIVAKRRLNCYFYQLLGEEIGVEEHDK
AIHQLEQWGFNVSPTYAKCLSVQDVLSYINEWQEKRFELPLDTDGVVLKVNNYDQREELG
FTAKIPRWAIAYKYQAESAISQLLSITYQVGRTGAITPVANLAPVHLAGTTVKRASLHNA
NEIERLGLHEGDWVSIEKGGEIIPKITTVISEKRKTDAKPIAYIQHCPECHTELTRKEGE
AKHYCPNHAGCPPQILGRIEHFLHKRAMDIDSLGTERIKTLIDQGYIKNYADLYELETQK
DRLLGLEMSQDQYQKTEEGYLYISLLKAFFALTEGISLSAIQKFLAEEQEKSLEETLKSF
ELFIRKSNKKVAQNTGNLLLLKDHIHYAALPTLEEYVPVSAVLKVLLGSRVSLEELLRVS
AHCSTVHAVLLELNLDLPSEVEDRIKKLKANTFQEGVISNMMEGIEKSKQQGFPKVLFAL
GIRNIGENTAQILAKEFKSIDALKTASAEALLAVNGVGETLVQSIQEFFGEQENLTIIER
LRGHGLSLDMQEEVRVLDSNQLEGMKILASGKLNHFKRDEIIDFIESNGGTYVKAVSKSL
DFIIEGEDMGPSKKEKAEKLGVKMISEEEFMKMVGKS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacaagaggctcaactccgtatatccgaacttagcaatcagatcaattatcat
aatcagctttattacaacgaagaccgaagcgaaatatcagatttcgagtttgatcagttg
ttgcaggaactgattactttggagacgcagttccctgaatttttggatgctgacagccct
tcccaacgggtaggtggtacgattaccaaggaatttgaaactgtggaacacgagtatcgc
atgctatctttgggtaacacctactctccagaggaactactagcttttgatgagcgagta
gccaagggattggggcatcgaaactatgagtatttctgcgaattgaaattcgatggagtt
gcaatcagtttagtatatgaaaatggaaggcttatccgtgcggtaacccggggagatggt
accaaaggggatgtggtcaccgagaatatcaaaaccatccgaaacatccctttacacatc
aaaggtgacaaggttcctgaaaaatttgaagtacgaggagagatctttttgcctcgaaag
gaatttgacaaaatcaatgccgagcgcgaagctaacggagaggcactcttggcaaaccca
agaaatgcagcctcgggaactgtcaaaatgcaagacagcagtatcgtggccaagcgaaga
ctcaattgttacttttatcaattgttgggagaggaaattggggttgaagaacacgataaa
gctattcaccaactggaacagtggggtttcaatgtctcccctacttatgccaaatgtttg
agtgttcaagatgtattatcctacatcaacgagtggcaagaaaagcgttttgaattgcct
ttggacactgatggggtagttttaaaagttaataattacgatcaacgggaggaattaggc
ttcacagcaaagattcctcgttgggccattgcttataaataccaagcagaatctgccatc
agtcaattactatccattacctatcaggttggcagaacaggagcaattacacctgtagct
aatttggcacctgtgcacttagcaggaacaacggtaaaacgcgcctccttacacaatgcc
aatgaaatcgaacgcttaggtttacacgaaggagattgggtgtccattgaaaaaggcggt
gaaatcatccctaaaataactaccgtcatttctgaaaaacggaaaaccgatgcgaaacca
atcgcctatattcaacattgcccagaatgtcacaccgaactgacccgaaaagaaggggaa
gcaaagcattactgtcctaatcatgccggatgtcctccacagattttgggacgaatcgaa
cacttcctgcataagcgcgccatggacattgattctttgggcacagaacgcatcaaaacg
cttattgatcaaggatatattaaaaactacgccgacctgtatgaactggaaacacaaaaa
gaccgattactcggtctggaaatgtctcaggatcaatatcagaaaacggaggaagggtac
ttatacatttctttgttgaaagccttttttgcgttaacagaaggaatatccctcagtgct
atccaaaaattcctagccgaagaacaggaaaagagtttggaggaaacgctcaaatccttt
gagttatttatccgcaaaagcaataaaaaggttgctcaaaataccggaaacttacttttg
ctcaaagatcatattcattatgctgcacttcctactttggaagaatatgttcctgtgagt
gcggttttgaaagttttgttgggatcgcgggtgagtttggaagagttgttacgagtaagt
gcacattgttcaaccgttcatgcggttttacttgaactcaatctcgacttaccttccgaa
gtggaagaccgaatcaaaaaactcaaagccaatacctttcaggaaggagtaatttccaac
atgatggaagggattgaaaaatcaaaacaacagggatttcctaaggttctctttgccttg
gggatacgaaatatcggagaaaatacagctcagattttagctaaggaattcaagagcata
gatgctttaaaaactgcctcagcggaagccctattggctgtcaatggtgtaggagaaacc
ttggtgcaaagtattcaagagtttttcggagaacaagaaaacttgaccatcattgagcgc
ttacgtggacatggactcagtttagacatgcaagaagaagtgcgtgttttggatagcaat
caattggaaggaatgaagattttggcatccggtaaattgaaccatttcaaacgggatgaa
attatagattttatagaatcaaatggcggcacctatgttaaggcagtgtcaaaaagtttg
gattttattattgaaggtgaagacatggggcctagtaaaaaggaaaaagctgaaaaattg
ggtgtaaaaatgatttcagaagaggaattcatgaagatggtcggtaaatcctaa
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integrated database retrieval system
