Musca domestica (house fly): 101898839
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Entry
101898839 CDS
T03448
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mde
Musca domestica (house fly)
Pathway
mde03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101898839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mde03400
]
101898839
Enzymes [BR:
mde01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101898839
DNA repair and recombination proteins [BR:
mde03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101898839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
SPN1_m3Gcap_bd
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
101898839
NCBI-ProteinID:
XP_058978159
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MDISETIKFRDICSLLNRVRKTDNKDKKCRIIKQYYASFCKHRERFREEQKLKPDMPEDG
RSSFYCILRCLIPKADTARQSYGLQMPTLGRVYIKALQLSAQSKEAELLEARNFCSIRGD
YAERVYRILKPRCSNSPSDLTLKEVHDMLDSVASENLLNTENVLTKLSQIASAEEQMWFV
RLLLKTMHLAIGEQRIFDLLHDQAKAMYQACANLSKLCCHLADNKFALINSSSQQLGNGP
APLVADITPFEHVRPQLCEVFPGNMEQIMASDVLYMETKMDGERFQLHYKDGCFKYISRN
GIDYTNSFGSSYDEENKLTMKLVHLLPIDMQSIILDGEMMVWDSLNNKYREKGENTDVKH
LKEERSWQPCFVVYDLLYWNGQNLLGIPYIQRMYKLRSLLREQEGVLQLMKSEKVLSVED
FRMKFQQALDQHAEGVVLKKQNAIYRPGCRNGSGWYKVKADHIDGLTTEFDLLVIGGFYN
RARTFVESFLVGVLKYISHQQFEVYSVGKVSNCTQQRVLLNNTLNSHWHLLSQEQPPLWY
HYRHTNAEGRPDVWIEPRNSVILQIKAADLNPSGAFALSMSLHFPRIQMWRNDKAWHECL
SLEEYKQLKQNSKGSGIKKIVKRNVSLDDFIGSQSKRRKLTPAEKRNLGLLSYEKQFDPN
NVEKTSQLFEGFSVCILSAALNRRYTAQYLKTLVVQNGGTIVENPLPNNPSCILIAGDIS
VRVQALCKSKKYDIVSLDWLLRTCEKQRIDITPLDFICITPEVKEKFAEVFDEYGDHYTT
FVRSKQLKRICDAMIIDNVPELDDEALNELENLIYPIKNINFFRNKNGYFYSIEHDSIHA
KLNFQWHAGNVICDRNIEETEFNRDEVLSKISYIFINLQQFHKTEFLEWLHERFTTEHLA
HIQIVSIRWILDSHKARMLQDIKEYTWHDFD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacatttccgaaacaatcaaattccgtgacatctgttctctgttaaatcgtgtgcgg
aaaaccgataataaggataagaaatgtcgtattattaaacagtactatgcatcgttttgt
aaacatcgcgagagatttcgagaggagcaaaagttgaagcctgatatgccagaggatgga
cgcagcagtttctattgtatacttcgttgtcttataccgaaagcagatacggctcgccag
tcgtatggtctacaaatgccaacactgggaagggtttacatcaaagctttacaactgagt
gcacagtcaaaggaagctgaactattggaagcacgaaatttttgcagtattcgtggtgac
tatgcggagagagtttatcggattcttaaacccagatgttcaaatagtccgagtgattta
accctgaaagaagttcatgatatgttggacagtgtggcaagtgaaaatttactgaacacg
gaaaatgttttaaccaaactttcacaaattgcctcagccgaagaacaaatgtggtttgtt
cgtctgctactcaaaacgatgcacttggcaataggtgaacaacgtatttttgatcttcta
catgatcaggccaaagcaatgtatcaagcctgtgctaatttatcaaaactttgttgtcat
ttggctgataataaattcgcgctgattaacagcagttcacaacagctaggaaatggtccg
gctccattggtggcagacattacaccctttgaacatgtacgtccacagctgtgtgaagtt
tttcccggaaatatggaacaaattatggcctcagatgtcctttatatggaaacgaaaatg
gatggtgaacgttttcaattgcactacaaagatggctgttttaaatatatttcacgtaat
ggcatcgattatacaaatagctttggctccagctatgacgaggagaataaattgacaatg
aaattggtacatttgttacccatcgatatgcaatcgattattttggatggagaaatgatg
gtttgggatagtttgaataacaaatatcgggaaaagggtgaaaatacagatgtaaaacat
ttgaaagaggaacgtagctggcagccctgttttgtggtctatgatttgctgtattggaat
ggccagaacttgttgggtattccatatatacaaagaatgtataagttgcgtagcttgtta
agggaacaggagggagttttgcaattgatgaaaagtgaaaaagtcttgagtgttgaagat
tttcgcatgaaatttcaacaagccctggatcagcatgccgaaggtgttgttttgaagaaa
caaaatgccatctatcggccgggatgtcgcaacggcagtggatggtacaaggtgaaggca
gatcacattgacggcttaacaaccgaattcgatttactagtcattggcggcttttacaat
cgtgccagaacttttgtagaatcatttttggttggtgtcttgaaatacatttcacaccaa
caatttgaagtctactccgtgggcaaggttagcaattgtacccaacagcgcgttctactc
aacaacacattgaacagtcattggcatttgttgtcacaagaacaaccaccgctgtggtat
cattatcgccacacaaatgccgagggacgtcctgatgtttggattgaacccaggaattca
gtgatcctacaaataaaggctgccgatttgaatccatccggagcttttgcacttagtatg
tctttgcattttccacgtatacaaatgtggcgcaatgataaggcatggcatgaatgtctt
tcgctagaggagtataagcagttgaagcaaaactccaaaggaagtggaataaagaagatt
gtcaagagaaacgttagcttggatgattttattggcagccaaagcaagaggagaaaacta
acgccggcagaaaaacggaatttgggtttgttatcctatgaaaagcaatttgatcctaat
aatgtggaaaagacttcccaactctttgagggctttagtgtttgcatattaagtgctgcg
ctaaacagacgttataccgcacaatatctgaaaacgttggtggtccagaatggtggcaca
attgtggaaaaccctctgcccaataatcccagttgtattttaattgccggtgatatttcg
gtacgtgttcaagccctatgtaaatccaaaaaatatgatattgtcagtttggattggtta
ctgcgaacgtgtgaaaaacaacgcatagatataacacctttggattttatttgcattaca
ccagaggttaaggaaaaattcgccgaggtatttgatgaatatggtgaccattataccacc
tttgtgcgttccaaacaactcaagcgtatatgtgatgccatgattattgacaatgtacct
gaactagatgacgaagctttaaatgagctggaaaatcttatttatcccattaagaacatt
aatttctttcgcaataagaacggttatttctatagcattgaacacgattctatacatgct
aaacttaattttcaatggcatgccggaaatgttatatgtgatcgtaatattgaagaaacg
gaatttaatcgcgacgaagttttatcaaaaatatcgtatatttttataaatctccagcaa
tttcataaaactgaatttttagaatggttgcatgagcgttttaccaccgagcatttagct
cacatacaaattgttagcattcgatggattttagattcacataaagccaggatgctacaa
gatattaaggaatatacatggcatgattttgattga
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