Musca domestica (house fly): 131805560
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Entry
131805560 CDS
T03448
Name
(RefSeq) TAR DNA-binding protein 43-like isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
mde
Musca domestica (house fly)
Pathway
mde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131805560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
131805560
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131805560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
131805560
NCBI-ProteinID:
XP_058984826
UniProt:
A0ABM3VGC6
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MDFVQVVEEDGEEPIELPIEPDKNLLLSTLQSTFPGASGLKYLNEETKCFRGIRLNDGKL
YPPSECGWGNHVYHCVFPKENKRKSDDQLENSTAKTKRMESRARCTDLIVLGLPWKTTEE
SLRAYFETFGEVLMAQIKKDVHSGQSKGFGFVRFGSYDVQARVLSNRHSIDGRWCEVKVP
NSKGAPNQIPCKVFVGRCTEDITAEDLKEYFSKFGEVTDVFIPRPFRAFSFVTFLDPEVA
ASLCGEDHIVKGVSLHVSSAAPKYEHHRNSYHNANNGGRNSHHNSHNENPHGGLFKSKGP
TMHNSSGNYYANTAPPPNEGGSAMLGGGNNTGGAPVNRENTYPRGNRGNYMMTQQPPAAN
TNNSSSNFNSSQNRPLDMHMQTLGINPPPGPNSTQNMGMGLNLNSLPMNTAILAAALNQF
GLLGNPEQSGNFLSWMAHSSNSNNMLANNPGNRGPNSVNSGANTANQPTEATNCNNTVQN
PPSQPNNGKYGMWSPK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgcaagtagtcgaagaagatggagaagagcccatagaattgcccatagag
ccggataaaaacttgctcttgtcaacactgcaatcaacatttccaggtgcaagcggcctg
aagtatcttaatgaagaaaccaaatgttttcgtgggattcgtttgaacgatggcaaatta
tatccgccaagtgaatgtggttggggcaatcatgtctatcattgtgtctttcccaaagaa
aacaagcgtaaaagcgatgaccaattggaaaactccacagccaaaacaaaacgtatggaa
tcaagggcacgttgtaccgatttaattgtccttggcttaccttggaagactacggaagaa
agtcttcgggcatattttgagacgtttggagaggttctaatggcacagattaaaaaggat
gtgcattcaggtcaatcgaagggatttgggtttgtgcgatttggttcgtatgatgtacag
gcaagagtcctgtctaataggcattcaattgacgggcgctggtgtgaagtgaaagttcca
aattccaagggtgcgccaaatcaaattccttgcaaagtttttgttggtcgttgtacagag
gacattacggcagaggacttgaaagagtatttttccaagtttggtgaagttacagatgtg
tttatacccagacctttcagagcatttagtttcgttacatttttggatccagaagtagcg
gcgtctttgtgcggagaggatcacatagtgaaaggagtgtcattacatgtttcaagtgct
gctcctaaatatgaacaccatcgaaattcctatcataatgctaacaatggcggaagaaat
tctcatcataatagtcataacgagaatccacatggtggcctctttaaatcaaaaggtcct
acaatgcacaacagtagcggaaattattatgccaatacagctcctccacctaacgaagga
ggttcagcaatgttaggtggaggtaacaatacaggtggggcgcctgttaatcgggaaaat
acttatcctcgaggtaatcgaggaaactacatgatgacacaacaaccgccagcggcaaac
acaaataacagcagcagtaatttcaatagcagtcaaaaccgacccctggacatgcatatg
cagacattgggcatcaacccccctccaggccctaattccactcaaaatatgggtatgggt
cttaatctcaactccttgcccatgaacacagcaatattggctgctgctctaaatcagttc
ggtttattgggaaatccggaacagagtggcaacttcctttcttggatggctcattctagc
aattcaaataacatgctcgcaaacaatccggggaataggggaccaaatagcgtcaattcc
ggtgcaaatacagcgaaccagcctacagaagcaacaaactgtaataatactgtacaaaat
ccaccatcgcagccgaacaatggaaaatatggaatgtggtctccaaaatga
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