Methylomonas sp. DH-1: AYM39_19930
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Entry
AYM39_19930 CDS
T04396
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00300
Lysine biosynthesis
mdh00550
Peptidoglycan biosynthesis
mdh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYM39_19930
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYM39_19930
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
AYM39_19930
Enzymes [BR:
mdh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AYM39_19930
Peptidoglycan biosynthesis and degradation proteins [BR:
mdh01011
]
Precursor biosynthesis
Amino acid ligase
AYM39_19930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
ANE57221
LinkDB
All DBs
Position
4486733..4488193
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AA seq
486 aa
AA seq
DB search
MKLSELLNGYSETETDPDISGLSLDSRRTAEGDAFFALSGSRQHGLAHAEQAVEGGAKAV
VFDPQGSALHLMALTGVPFIAVTGLAQKLGEIAARFYGRPSEKLDVIGVTGTNGKTTCSQ
LIAQALPDCGVIGTLGWGDVGSLQATANTTPDALDIQRILAEFVSQGKRTAAMEVSSHGL
QQGRVNAVHFKGAVFTNLSRDHLDYHGDMQSYLQAKLELFKTPGLQFAVVNLDDQSSVQV
LDSIGQGVQVWTFSTGGRTVANAECVTAENAEFSAAGIEFDAVWRGQRHKAASSIVGRFN
LENLLAVLCVLLAQGTPFPTAVARLANLSAIAGRMEKFGGHGKPTVFVDYAHSPDALEKV
LKAIKGKQRLRLVFGCGGDRDKGKRPEMGRIAETWADQVIVTDDNPRSEAPAAIVADILA
GCRSEKVTVINDRATAINTAIQQAAPDDCVLIAGKGHEDYQEIAGVKWPFSDSALVQQTL
AEWRKS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgagcgaattgctgaacggatatagcgaaaccgaaaccgatcccgacatctcc
ggcctgtccctggatagccgccggacggcagaaggcgatgcgtttttcgccctgagcggc
tcccggcagcatggcctggcccatgccgaacaggcggtcgaaggcggcgccaaagcggtg
gtattcgatccgcaaggcagcgcgctgcatttaatggcactaaccggtgtaccgtttatc
gcggttaccggcctggcgcaaaaactcggcgaaatcgccgcccgtttttacggccggcct
tcggaaaaactcgacgtcatcggcgtgaccggcaccaacggcaaaaccacctgtagccaa
ttgatcgcgcaggcgctgccggattgcggcgtgatcggcacgttgggctggggcgacgtg
ggtagcttgcaggccacggccaacacgacgccggacgcgctggacatacaacgcatattg
gccgaattcgtcagccaaggtaaacgcaccgcggcaatggaagtgtcctcgcacggtttg
cagcagggccgagtcaatgccgtgcacttcaaaggcgcggtctttaccaatttgagccgg
gaccacctggattaccacggcgatatgcagagctatctgcaagccaagctggaattgttc
aaaacgccgggcttgcaatttgccgtggtcaatttggacgaccaaagcagcgtgcaggta
ttggacagtatcggccaaggcgtccaggtctggaccttcagcactggcggccgcacggta
gcaaacgcggaatgcgtcacggccgaaaatgcggaatttagcgcagccggcatcgaattc
gacgccgtttggcgcggccaacggcataaagccgccagcagcattgtcggccggttcaat
ttggaaaacctactggcagtgttgtgcgtattgctggcccaaggcacgccgttcccgacc
gcggtagcgcgcttggctaatttatcggcaatcgccggccggatggaaaagttcggcggc
cacggcaaacccaccgttttcgtggactacgcccatagtccggatgcgctggaaaaagta
ctgaaagccatcaagggcaagcaacggctgcggttggtgttcggctgcggcggcgaccgc
gacaaaggcaaacgcccggaaatgggccggattgccgagacctgggcggatcaggtcatc
gtcaccgacgataatccgcgaagcgaagctccggccgccatcgtcgccgacattttggcc
ggctgccgcagcgaaaaagtaaccgtaattaacgacagagccacggccatcaacacagcc
atacaacaagcagcccccgacgattgcgtactgatcgccggcaagggccacgaagattac
caagaaatcgccggcgtaaaatggccgttcagcgatagcgcgctggtgcaacagaccttg
gcggagtggcgtaaatcatga
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