Methylorubrum extorquens DM4: METDI3720
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Entry
METDI3720 CDS
T00947
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00540
Lipopolysaccharide biosynthesis
mdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
METDI3720 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
METDI3720 (lpxC)
Enzymes [BR:
mdi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
METDI3720 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
Lipid A
METDI3720 (lpxC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
CAX25359
UniProt:
C7CA07
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Position
3660941..3661888
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AA seq
315 aa
AA seq
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MRTNQQTTLKTSVTLTGIGVHSGNPAEITLHPAKANHGIAFLRTGTTTGNDRIIKAHFAC
VSATELCTVIGDVETGAVATIEHLMSALYGLGVDNALVEIDGPEMPILDGSARLFVQAID
SVGLALCGAPRRWIKVLQPVRIEAGRAFAELRPIDRGFRLDVEIDFESPVIGRSRKAMDL
TPAAYRREIAPARTFGMMKDVERYWKAGFALGASLDNTVAVGETAVVNPEGLRFSDEFVR
HKFLDAVGDLALAGLPLQGAYRSYCGGHRMNVGILEALFADRANYAIVEGQGTRRETARA
DFGAGLGLAAFAAEL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgaaccaacagacaacactcaaaacgtccgtgacgctgaccggaatcggagtc
cactccggcaacccggcggagatcacgctccaccccgccaaagccaaccacggtatcgcc
ttccttcggacgggcacgaccaccggcaacgaccggatcatcaaggcccacttcgcctgc
gtctccgccaccgagctgtgcaccgtcatcggtgacgtcgagaccggcgccgtcgccacc
atcgagcatctgatgtcggccctttacgggctcggtgtcgacaacgctctggtcgagatc
gacggccccgagatgccgatcctcgacggcagcgcccgcctcttcgtccaagccatcgac
agcgtcggcctggccctctgcggcgccccgcgccgctggatcaaggtgctccagcccgtt
cgcatcgaggccggccgggccttcgccgaactccgcccgatcgaccgcggcttccgcctc
gacgtggagatcgacttcgaatccccggtgatcggccgctcgcgcaaggcgatggacctg
accccggccgcctaccgccgcgagatcgcccccgcccgcaccttcggcatgatgaaggac
gtggagcgctactggaaggcgggcttcgcgctcggcgcctccctcgacaacacggtcgcc
gtcggcgagaccgccgtcgtcaacccggaaggcctgcgcttttcggacgagttcgtccgt
cacaagttcctcgatgcggtcggcgatctcgcgctagccggcctgccgctccagggcgcc
taccgctcctattgcggcggccaccgcatgaatgtcggcatcctcgaagcgctgttcgcc
gaccgcgcgaactatgccatcgtcgagggccagggcacccgccgcgagaccgcccgcgcc
gacttcggtgccggcctggggctcgccgccttcgccgccgaactgtaa
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