Methylorubrum extorquens DM4: METDI4223
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Entry
METDI4223 CDS
T00947
Name
(GenBank) putative short-chain dehydrogenase/reductase SDR
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00061
Fatty acid biosynthesis
mdi00780
Biotin metabolism
mdi01100
Metabolic pathways
mdi01110
Biosynthesis of secondary metabolites
mdi01212
Fatty acid metabolism
mdi01240
Biosynthesis of cofactors
Module
mdi_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
METDI4223
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
METDI4223
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
METDI4223
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mdi01004
]
METDI4223
Enzymes [BR:
mdi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
METDI4223
Lipid biosynthesis proteins [BR:
mdi01004
]
Fatty acid synthase
Component type
METDI4223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
KR
SDR
Epimerase
DUF1776
THF_DHG_CYH_C
Eno-Rase_NADH_b
Shikimate_DH
DUF3613
Motif
Other DBs
NCBI-ProteinID:
CAX25854
UniProt:
C7CDU0
LinkDB
All DBs
Position
4158664..4159404
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AA seq
246 aa
AA seq
DB search
MSELAGKRALVTGASRGIGAAIALALAERGADVAITYERSAERAADVVRAIEGQGRRGLA
IQADSADAAAVKRSVEAAAGELGGLDILVNNAGIARGGPVTEMSLADIDALLAVNIRSVV
LASQAAIPHLGEGGRIISIGSCLGERVPFPGVTVYSMTKSALLSFTRGLARELGPQGITV
NLVQPGSTDTDMNPSNGEQSDLQRAMTALGHYGRPEDIAAAVAFLASPAARQITGTTLTV
DGGANA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactggcaggcaagcgcgccctcgtaaccggcgcgtcccgcgggatcggcgcc
gccatcgccctggcgctggcggagcggggggcggacgtcgcgatcacctacgagcggtcg
gccgagcgagcggcggacgtcgtgcgagcgatcgagggacagggccggcgcggcctcgcc
atccaggccgacagcgcggacgccgcggcagtgaagcgctcggtcgaggccgcagccggg
gaactcggcgggctcgacatcctcgtgaacaatgccggcatcgcccgcggcggcccggtg
acggagatgtctttggccgatatcgacgcgctgctggccgtgaacattcgctccgtggtg
ctggcctcgcaggcggcgatcccgcatctcggggagggcggacggatcatctcgatcggc
tcgtgcctcggcgagcgcgtgccgtttcccggtgtcacggtctactcgatgacgaagtcc
gccctgctctcgttcacccgtgggctcgcccgcgaactcgggccccagggcatcaccgtg
aacctggtgcagccgggatcgaccgacaccgacatgaatccgtccaacggcgaacagtcg
gacctccagcgcgccatgaccgcgctcggccattacggccggccggaggacatcgctgcc
gcggtcgccttcctggcgagcccggcggcgcgacagatcacgggcaccaccctcacggtc
gatggcggcgccaacgcctga
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