Methylorubrum extorquens DM4: METDI4906
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Entry
METDI4906 CDS
T00947
Name
(GenBank) putative carbon-carbon lyase, HpcH/HpaI aldolase/citrate lyase family
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00630
Glyoxylate and dicarboxylate metabolism
mdi00660
C5-Branched dibasic acid metabolism
mdi00680
Methane metabolism
mdi00720
Other carbon fixation pathways
mdi01100
Metabolic pathways
mdi01120
Microbial metabolism in diverse environments
mdi01200
Carbon metabolism
Module
mdi_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
METDI4906
00660 C5-Branched dibasic acid metabolism
METDI4906
09102 Energy metabolism
00720 Other carbon fixation pathways
METDI4906
00680 Methane metabolism
METDI4906
Enzymes [BR:
mdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
METDI4906
4.1.3.25 (S)-citramalyl-CoA lyase
METDI4906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
CAX26520
UniProt:
C7CI89
LinkDB
All DBs
Position
4800843..4801892
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AA seq
349 aa
AA seq
DB search
MKLPRRFFQPLAAGAPEPFRELPIKLERMIHFVPPHNEKVRARVPELAKTVDVVLGNLED
AVPADQKEAARKGFVEMARATDFAASGTGLWTRINALNSPWILDDLFTIVAEVGAKLDVV
MVPKVEGPWDIHYIDQLLAQLEARHGVTKPILVHAILETAEGVANVDAIASASPRMHGMS
LGPADLAASRGMKTTRVGGGHPDYRVLSDPKGDAERASAQQDLWHYTIAKMVDACMANGI
KAFYGPFGDFSDSAACEVQFRNAFLMGCAGAWTLHPSQVALAKTVFAPDPAEVNFASRIV
EAMPDGTGAVMIDGKMQDDATWKQAKVIVDLARLVAEKDPDLAKVYNLP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccgcgccgcttcttccagcccctcgccgcgggtgcgcccgagccgttccgc
gaactgccgatcaagctcgagcggatgatccacttcgtgccgccgcacaacgagaaggtc
cgcgcccgcgtgcccgaactcgccaagacggtcgatgtggtgctcggcaacctggaggac
gcggtccccgccgaccagaaggaggcggcgcgcaagggcttcgtcgagatggcccgcgcc
accgatttcgcggcctccggcaccggcctgtggacgcgcatcaatgccctgaactcgccc
tggatcctcgacgacctgttcaccatcgttgccgaggtcggcgcgaagctcgacgtggtg
atggtgccgaaggtcgagggcccctgggacatccactacatcgaccagttgctggcccag
ctcgaggcgcgccacggcgtgaccaagccgatcctcgtccacgccatcctcgagaccgcg
gaaggcgtggccaacgtcgacgccatcgcctccgcctcgccgcgcatgcacggcatgagc
ctcgggcccgccgatctcgcggcctcccgcggcatgaagaccacccgcgtcggcggcggt
cacccggattaccgcgtcctgtccgatcccaagggcgatgccgagcgggcgtccgcccag
caggatctgtggcactacaccatcgccaagatggtcgatgcctgcatggccaacggcatc
aaggcgttctacggcccgttcggcgacttctccgattcggccgcctgcgaggtgcagttc
cgcaacgccttcctgatgggctgcgccggcgcctggaccctgcatccgagccaggtcgcc
ctggccaagaccgtgttcgcgcccgacccggccgaggtgaacttcgcctcccgcatcgtc
gaggcgatgcccgacggcaccggtgcggtgatgatcgacggcaagatgcaggacgacgcc
acctggaagcaggccaaggtcatcgtcgatctcgcccggctcgtggccgagaaggatccg
gatctcgccaaggtctacaatctgccctga
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