Malus domestica (apple): 103400248
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Entry
103400248 CDS
T03194
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103400248
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103400248
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103400248
NCBI-ProteinID:
XP_028949170
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Position
15:complement(join(9067925..9068155,9068405..9068530,9068803..9068911,9069212..9069293,9069389..9069600,9070121..9070263,9070702..9070845,9071569..9071703))
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AA seq
393 aa
AA seq
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MQDRLVSLLIFSIVLSGLIDIGYSERTFDVLNYRAVGDGEADDSEAFVNAWKALCGADEV
GDVPTLVIPKGKTFLLQPIEFEGPCRPKRVHIQVLGNVVAPKTVDAWKECPSSNTWLQFT
NVANLILDGSGTINGQGSPWWQALHFNRCDNLRLSGLTHVNSPKAHIGINHCINVDVSHL
TIIAPAESPNTDGIDISNSINVNIHDSFIGTGDDCIAINSGSSNINITNIACGPGHGISV
GSLGKNGAHETVENVYVRDCSFNGTQNGARIKTWQGGSGYAKNIVFEKITLVAAENPIII
DQFYCDAKAKVSCDNHQTSAVTVSEVRYIAFEGTSGSEEAITLNCNQIHGCQNIVMEEIH
ITSAVPSKKIYASCSHAKGTCNDSTVPVSCLDK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccgactcgttagccttttgatatttagcattgtgctgtctgggttgattgat
attgggtacagtgaaagaacatttgatgttcttaattatagagctgttggggatggagaa
gctgacgattctgaagcttttgtaaatgcatggaaagccttatgtggagcagatgaagtt
ggtgacgtacctacactagttatacctaagggaaaaacattcttactgcagcctatcgaa
tttgaaggcccttgcaggcctaagagggtccatattcaggtcctggggaatgtagtggca
cccaaaacggtggatgcatggaaagagtgcccatcatcaaatacctggctccaatttaca
aatgtggcaaatctcatactggatggttcaggaacaatcaatggccagggttcaccttgg
tggcaggctctacactttaacagatgtgacaatcttcgtttaagtggacttactcatgtc
aatagcccaaaagctcatattggtataaaccactgcatcaacgtcgatgtctcccatctt
actataattgcacctgccgaaagtccgaatactgatggaattgatatctcaaactctatc
aatgtcaatattcatgactcttttattggaactggtgatgactgtatcgctatcaattct
gggtcttccaacatcaacattactaacattgcgtgtggaccaggccatggaattagtgtg
ggaagcttaggaaaaaatggagctcatgaaacagtagaaaatgtttacgtgagagattgt
agtttcaatggtactcaaaatggagcaagaatcaaaacatggcagggtggatctggctat
gctaagaatatagtttttgagaagatcacacttgttgcagctgaaaaccctatcatcatt
gaccaattttattgtgatgctaaagctaaagtaagctgcgataatcatcagacgtcagct
gtgaccgtgagcgaggtgagatacattgcttttgaaggaacttctggtagcgaggaggcg
atcacattaaactgcaaccagattcatggctgtcaaaacattgttatggaagaaattcat
atcacctctgctgttcctagtaagaagatttatgcaagttgcagccatgccaaaggaacc
tgcaatgacagtactgtgcccgtatcttgcctcgacaagtga
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