Malus domestica (apple): 103400479
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Entry
103400479 CDS
T03194
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103400479
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103400479
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103400479
03036 Chromosome and associated proteins [BR:
mdm03036
]
103400479
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103400479
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103400479
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103400479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Ribonuc_red_lgC
Motif
Other DBs
NCBI-GeneID:
103400479
NCBI-ProteinID:
XP_008337354
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All DBs
Position
15:complement(join(14245274..14245630,14245838..14246989))
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AA seq
502 aa
AA seq
DB search
MLKQILSKLPRKSSKSDSLDSAGSDSGNNTPNLGSGFQCTIGGSSLTSKLNVVKRVSSAV
FPSSIAAGAEAVEPHLSFKEVSNPQKHSLFISKLNLCCEFVDSSDPVKQDLKRETLIELV
DYVSSGTVKFTEPAISAVCKMCAVNLFRVFPPKYRSNFTGGETDDEEPMFDPSWSYLQIV
YDLLVRFISYTSLDIKVAKKHVDHSFIVKLLDLFDSEDPRERDCLKTILHRIYGKFMVHR
PFIRKAVSNIIYRFVFETERHNGISELLEIFGSVISGFALPLKEEHKIFLWRALIPLHKP
KSVGIYHQQLTYCVVQFIDKDPKLASTVIKGLLKFWPVTNSQKELMFLSELEEVLEMTSM
DEFQRIMVPLFRRIRCCLNSSHYQVAERAHLLWNNEHILNLIAHNRQVIFPLVFPAIERN
TQNHWNQAVLNLTLNVKKTFCDMDEELVLACQFKLEEENIRSSAAAEKRRLTWERLETAA
GVQPVACNFLSPIKPPACPVVC
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcaaattctaagcaaacttcctcgcaagtcgtcaaaatctgattcactagat
tctgcagggagtgattctggcaacaatactcccaatttggggagtgggttccaatgtaca
attggtgggagttctcttacaagcaaattaaatgttgtcaagcgagtgtcttcagcagtt
ttcccgtcaagcattgcagctggagctgaggcagtggagccccatctatccttcaaggag
gtttccaaccctcagaagcatagtctatttatcagtaagctgaacctttgctgtgagttt
gttgattccagtgatccagttaagcaagatctcaaacgcgaaacattgatagaacttgtt
gattatgtttcttctgggactgtgaagttcactgaaccagcaatttctgctgtgtgtaaa
atgtgtgcagtcaacctgtttagagtttttccacctaagtaccgatctaattttactggg
ggtgaaacagatgatgaagaaccaatgtttgatccttcttggtcatacctgcaaattgtg
tatgatcttctggttcggtttatcagttatacttcacttgacataaaggtggcaaaaaag
catgtggatcactcttttatcgtaaaattacttgacctctttgactctgaggacccaaga
gaaagagactgtttgaaaaccattctgcataggatttatggaaagttcatggtacacaga
ccctttattcggaaagctgtcagcaatatcatatatcgttttgttttcgaaactgaaagg
cataatggaatttctgagctgttggaaatttttggaagtgtaattagtgggtttgctttg
ccattgaaggaggaacacaagatatttttgtggagggctcttattcctctacacaaacca
aagtcagtgggtatttatcatcagcaattgacatattgtgttgtacagttcatagataag
gatccgaagttggcaagtactgtaataaagggtttgttgaagttctggcctgtaacaaat
agccagaaggagttgatgtttctaagtgagttagaagaggttttggaaatgactagcatg
gatgagtttcaaaggatcatggttccattgttccggcgcataagatgctgcctcaatagt
tctcattaccaggtggctgaacgagcccacttgctgtggaacaatgaacacatccttaac
cttatcgcacataaccgccaggtaatctttcctcttgtcttcccagctattgagcgaaac
acccaaaaccattggaatcaagcagtgctgaacctgaccctcaatgtgaagaagacattt
tgcgatatggatgaggagctggtacttgcctgtcaatttaagttggaggaggaaaatata
aggtcaagcgctgcagctgagaagcgaaggttaacatgggaacgcttggaaactgctgct
ggtgtccaacctgtagcctgtaactttttatctcccataaagcctcccgcgtgtcctgtt
gtctgctaa
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