KEGG   Malus domestica (apple): 103400570
Entry
103400570         CDS       T03194                                 
Name
(RefSeq) coatomer subunit beta'-3-like
  KO
K17302  coatomer subunit beta'
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103400570
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mdm04147]
    103400570
Membrane trafficking [BR:mdm04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    103400570
Exosome [BR:mdm04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   103400570
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_DCAF12 TPR_GEMI5
Other DBs
NCBI-GeneID: 103400570
NCBI-ProteinID: XP_028950965
LinkDB
Position
15:join(14777719..14777721,14777895..14777915,14778022..14778083,14778193..14778247,14778741..14778777,14778858..14779183,14779281..14779412,14779525..14779673,14780108..14780176,14780372..14780522,14780630..14780695,14781301..14781489,14781930..14782070,14782161..14782235,14782355..14782531,14782671..14782762,14782852..14782968,14783307..14783421,14783581..14783652,14783771..14783967,14784055..14784148,14784343..14784449,14784605..14784734,14785188..14785328)
AA seq 905 aa
MPLRLDIKRKFVQRTERVKSLDLHPSEPWILASLYSGTVYIFNYQSQSMAKSFEVTDLPV
RSAKFVVRKQWIVAGADDMFIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDHTVKIWNLVSPDPNFT
LDAHSKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPVIISGSEDGTVRIWHSTTYRLENTLNYGLERVWAFGYMKGSRRIVIGYDEGAIMVKIG
REVPVASMDSGGKIIWAKHNEIQTVNIKSVGADFEATDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGECAVRETTSRIKVYSKTFQ
EKKNVRPTFSVEHIYGGVLLAMRSNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVAI
TSDSSFYILKYDRDVVSSYFDSGRPVDELGVEDAFELLYEINERVRTGLWVGDCFVYNNA
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRLFLIDKEFNVIGYTLLLSLIEYKTLVI
RGDLERAKQIFPTIPPEQHNSVARFLESRGMLEDALEVATDADYKFDLAIQLGRLEIAKE
IATGAQSESKWKRLGELAMSTGKLDLAEDCLSNGMDLSGLLLLYSSLGDAQGISKLASLA
KEQGKNNVAFLCLFMLGKLEECIQLLLESERIPEAALMARSYLPSKVSEIVSIWRNDLNK
VNKKAAESLADPQEYPNLFEDWQVSLALESKDAENRGIYPPAEQYPVYAEKPTTNLVERF
RSMQIDEEATIENGDLDHEDVQENGEDQGEGEAVEEDADSMNGVVLVNGNQDEELDKNDE
TTSSP
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctctcaggctcgatatcaagcggaaatttgtgcaaagaaccgagagagttaagtct
ttggatctacatccatctgagccatggatccttgcgagtctgtattccggaactgtgtac
atcttcaattaccagtcacagagcatggcaaagtcttttgaagtcactgatttgccagtt
cggtcagcaaagtttgtagtgcgtaagcagtggatagtggctggagctgatgacatgttt
attcgtgtatacaactataatacaatggataaagttaaagtctttgaagcacactcggac
tacattagatgtgtggctgtccatccaacacttccatatgttttgtcatcatccgatgac
atgcttatcaaactgtgggattgggaaaaaggttggatgtgtactcagatatttgaagga
cattctcactatgtgatgcaagtgacctttaaccctaaagacaccaacacttttgcaagt
gcttccttggatcatactgtgaagatctggaatcttgtctcccctgacccaaattttaca
ttggatgctcactcgaaaggggtaaattgtgttgattacttcactggcggtgataaacca
tacttaatcacaggttcagatgatcatacagcaaaggtgtgggactatcagacaaaaagc
tgtgttcagacacttgatggacatactcacaatgtatctgcagtttgctttcatccggaa
cttccagttataattagtggttcagaggatggaactgttagaatatggcactcgaccact
tatcggcttgaaaacacattgaattatggacttgaacgtgtttgggcttttgggtacatg
aaaggttcacgccggattgtaattggttatgatgaaggagccataatggttaaaattggt
cgagaagtaccagttgctagcatggatagtggtgggaaaattatttgggcaaagcataat
gagattcaaactgtgaatatcaaaagtgttggagcagattttgaggctacagatggagaa
agattgcctttggccgtgaaggagttgggaacctgtgacctttatcctcaaagtttgaag
cacaaccccaatggaaggtttgttgttgtttgtggagatggcgagtacataatatacaca
gctttagcatggagaaatagatcctttggctcagcattggaatttgtttggtcatcggat
ggagaatgtgctgttagggaaactacatcaaggataaaagtttatagcaaaacgttccag
gaaaagaagaatgttcgaccaacattttctgtagaacatatttatggaggggtcttactg
gcaatgcgctcaaatgacttcatatgcttctatgactgggcggaatgcagattgattaga
cgtattgatgtcaatgttaagaatgtttattgggctgatagtggcgatttggtggcaatc
acaagtgattcatcattctacattctaaaatacgatagggatgtagtctcatcctatttt
gacagtggaaggccagttgatgaactaggtgtagaggatgcttttgagctcctctatgaa
ataaatgagcgtgtcagaactggattatgggtcggggactgtttcgtttacaataacgct
tcttggcgacttaactattgtgttggtggcgaggtgaccacaatgtttcacctggaccgg
cccatgtacttgctgggatatcttgccaatcaaagtcgtctctttctaattgataaagag
tttaatgtcattggatacaccttgcttctcagcttgatcgagtacaaaacacttgttata
cgtggagatttagagcgtgcgaagcaaatctttccaacaattcctccagagcaacataat
agtgtggctcgatttttggaatctcgaggtatgttggaggatgcactggaagtggcaaca
gatgctgactacaagtttgatcttgctatacagctgggtagacttgagattgcaaaggaa
attgctacaggagcccaaagtgaatccaaatggaagcggctgggagaattagctatgtcc
actgggaagcttgatttggctgaagattgtctatcaaatggaatggacctttctggcttg
ttgcttctctattcttctcttggagatgcccaaggaatatcaaaacttgcatcccttgcc
aaagaacaaggaaagaataatgttgcattcctttgtttatttatgctgggtaaattggaa
gaatgcatacagctgttgttggaaagtgaaaggatacctgaagcagctttaatggcacga
tcttacctaccaagcaaggtctcagagatagtttcaatttggagaaatgacctgaacaag
gttaataaaaaagctgccgaatcattggccgatccacaagagtatcctaatttgttcgag
gactggcaggtttctcttgcccttgagtctaaagatgcagaaaatagaggcatatatcct
cctgctgaacaatacccagtctatgctgagaagccaaccaccaacctagtggaaaggttc
agaagcatgcaaattgatgaagaagcgacaatcgaaaatggagatctggatcatgaggat
gtgcaggagaatggagaagatcaaggtgaaggagaggctgttgaggaggatgctgattcc
atgaacggtgttgttcttgtaaatggaaaccaggatgaagagttggataaaaatgatgaa
actacttcatcaccctaa

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