KEGG   Malus domestica (apple): 103400591
Entry
103400591         CDS       T03194                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like isoform X1
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
mdm  Malus domestica (apple)
Pathway
mdm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103400591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103400591
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    103400591
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 103400591
NCBI-ProteinID: XP_028946197
LinkDB
Position
02:complement(join(9828811..9829021,9829116..9829229,9829514..9829617,9829697..9829804,9829967..9830047,9830136..9830204,9830318..9830407,9830583..9830672,9831160..9831249,9831380..9831445,9831517..9831756,9832117..9832233,9832476..9832610,9833230..9833352,9833461..9833550,9833654..9833710,9833904..9833991,9834097..9834282,9834722..9834845,9834983..9835079,9835214..9835306))
AA seq 790 aa
MISDGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEEARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMSRGIQNPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVKDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDLYKETVLP
RVLEQVVNCKDEIAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLME
RLSNYAASSTEVLPEFLQVQAFSKLSNAIGKVIEAQVDMPIIGVVTLYSSLLKFTLHVHP
DRLDYADQVLGSFVKKLSGKGKIQDSRATKQVVALLSAPLEKYNDIVTALKLTNYPRVLE
FLDSGTNKVMATVIIQSIMKNTTHVLTAEKVEALFELIKGLIEDLDGTLNDEVDEEDFKE
EQNSVARLIQMFSNDDPEEMFKIICTVKKHILVGGPTRLPFTVPPLVFSSLKLVRKLQAQ
DENPFGDDASTTPKKIFQLLTQTIEALLNVPAPELALRLYLQCAETANDSDLEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKADQC
RAIYACSHLFWVDNQESMKDGERVLICLKRALRIANAAQQMSNATRGSTGSVTLFVEILN
KYLYFFEKGNPQITVASVQSLIELVTTELQSDSASAEPSTDAFFKSTLRYIQFQKQKGGA
VGERYESIKV
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatctcggacggagttgaagatgaagagaaatggctggcagctggaatcgccggcctc
caacagaacgccttctatatgcaccgagctctggactcgaacaatctcagagacgcgctc
aagtactcagctcagatgctgtcggagctccggacctcgaagctttcccctcacaagtac
tacgaactctatatgcgggcgtttgacgaattgaggaaattggaaatgttcttcaaggag
gaggctcggcgcggctgctccattatcgatctctatgagcttgttcagcacgccggcaac
atattgcctagattgtatcttctctgtacagtaggttctgtgtacatcaaatctaaggaa
gctcctgctaaggatgtcctaaaagatctcgttgaaatgtcccgtggcattcagaatcct
gtacgtgggctgttcttaaggagttacctttctcaagtgagtagggacaaattgcctgat
attggttctgaatatgaaggagatgccgacactgtcaaggacgctgttgagtttgtgctc
caaaatttcactgagatgaacaaactttgggtgcggatgcaacatcagggtcctgcccgg
gaaaaggagaaacgggagaaagaaagaagcgagctacgtgatcttgttggtaaaaacttg
cacgtcctaagccagatagaaggtgttgatttggatttgtacaaagagaccgtgcttccc
agagtcctggagcaggttgtcaattgtaaggatgagattgcacagttttatttgatggat
tgcataattcaagtctttcccgatgagtaccacttgcaaactcttgacgtattgttgggt
gcttgcccccaacttcagccatctgttgatattaagacagttctatcccagttaatggaa
agactttcaaattatgctgcttcaagtacagaagtattgcctgagtttttacaagtacaa
gctttttcaaaactgagcaatgctattggaaaggtgattgaagcccaagttgacatgcct
atcatcggtgttgtcactctatattcatctcttcttaaattcaccctccatgtgcaccct
gatcgacttgattatgctgatcaagtgttgggctcatttgttaagaaactctctggaaaa
gggaaaattcaagacagcagggcgacaaaacaagtggttgcacttttaagtgctccactt
gagaaatataatgatattgtcacggctttgaagcttacaaattatcctcgcgtcctggaa
ttccttgatagtggaacaaataaagtcatggctactgttataattcagagcattatgaaa
aatacaactcatgttttaactgctgagaaggtcgaggctttgtttgaattaataaaagga
cttattgaggatttggatgggactcttaatgatgaggttgatgaagaagatttcaaggag
gagcaaaattcagttgcacgacttattcaaatgttttctaatgatgatcctgaagagatg
tttaagatcatatgtactgtgaagaagcacatcctggttggaggaccgacgcgtttgccc
tttactgtccctcccctagttttctcttctctaaagttggttaggaaattgcaagcccag
gacgagaatccatttggagatgatgcatcaaccacaccaaagaaaatttttcagctcttg
actcagactattgaggctttgttgaatgttccagcacctgaactggcattacggttatat
ttgcaatgtgctgagactgcaaatgactctgatttggaacccgttgcctatgaattcttc
acccaagcatatattctttacgaagaagaaatttcagattcgaaagcacaggtgactgcc
attcatctgataattgggactctccagaggatgcatgtatttggcgttgagaacagggat
actttaactcacaaagccacagggtattcggcaaagcttttaaagaaggctgatcagtgc
cgagctatatatgcttgctcgcacctcttctgggtcgacaatcaggagagcatgaaggat
ggagaaagggtactgatttgcctaaagcgagctttacgaatcgctaacgctgcccaacag
atgtccaatgctacacggggtagcactggttcagtaacgctctttgttgaaatactgaac
aagtacctctatttcttcgagaaggggaacccacagataacagttgcttcagtccaaagc
ctgattgaattggtcacaactgaactgcaaagcgactcggcctcagcagagccatctaca
gatgctttctttaaaagcacactgcggtacattcagttccagaagcagaaaggtggtgca
gttggtgaaagatatgagtccatcaaggtgtga

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