Malus domestica (apple): 103400610
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Entry
103400610 CDS
T03194
Name
(RefSeq) protein transport protein SEC23 E
KO
K14006
protein transport protein SEC23
Organism
mdm
Malus domestica (apple)
Pathway
mdm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103400610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103400610
Membrane trafficking [BR:
mdm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103400610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
103400610
NCBI-ProteinID:
XP_070676505
LinkDB
All DBs
Position
04:join(2427119..2427874,2427989..2428162,2428506..2428667,2430169..2430311,2430976..2431051,2431179..2431351,2431472..2431553,2432245..2432322,2432730..2432891,2433008..2433271,2433360..2433464,2433779..2433925)
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AA seq
773 aa
AA seq
DB search
MSEMANTDPEGIDGVRMTWNVWPRTKVEASKCVIPLAACISPIRSHPDIPTLPYAPLRCK
TCSAALNPFARVDFTAKIWICPFCYQRNHFPPHYAAISETNLPGELYPQYTTLQYALPTD
SAAPQSLPSPVFLFVLDTCMIEEEMGYVKSALKRAIGLLPDNALVGFVSYGTQVQVHELG
FSDLSKVYVFRGSKEISKEQVLEQLGLGNLGRRPGPIGGGGYQLKGVQNGLPSAGVTRFL
LPASDCEYTLNTLLDELQTDQWPVPQGSRASRCTGVALSVAAGLLGACVPGTGARIVALV
GGPCTEGPGAIVSKDLSDPVRSHKDLDKDAAPYFKKAIKFYENLAKQLVSQGHVLDLFAS
ALDQVGVAEMKVAIERTGGLVVLAESFGHSVFKDSFKRVFEEGEQSLGLCFNGMLEINCS
KDIKIQGIIGPCTSLEKKGPAVADTAIGEGNTTAWKMCGLDKSTCLTVFFDLSSSDQSNT
PGTVNPQLYLQFLTSFQNPEGQMMLRVTTITRQWIDSSVSSEELVQGFDQETAAVVMARK
TSLKMESEESFDATRWLDRGLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQF
VQVFNNSPDETAYFRVLLNRENISNAAVMIQPSLISYSFNSLPQPALLDVASIAADRILL
LDSYFSIVIFHGMTIAQWRNMGYQNQPEHQAFAQLLQAPHDDTQLIVRDRFPVPRLVVCD
QHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggcgaacacagacccggaagggatcgacggagttcggatgacgtggaac
gtctggccgcgcaccaaggtggaggccagcaagtgcgtgatcccactggccgcctgcatc
tccccgatccgctcccaccctgacatccccacgctcccctacgcgccgctccgctgcaag
acctgctctgccgctctcaacccctttgcgcgcgtcgacttcaccgccaagatctggatc
tgccctttctgctaccagcgcaaccacttcccgcctcactacgccgcgatctccgagacc
aatctccccggtgagctataccctcagtacaccaccctccaatacgctttgccgacggat
tccgctgcccctcaatctctgccgtccccggtctttctcttcgtgctcgacacgtgtatg
atcgaggaggagatgggatatgtcaaatcggcgctcaaaagggcaattgggttgctgccc
gataatgcgcttgttgggttcgtttcgtatgggacccaagttcaggtccatgaattgggg
ttctctgatttgtcgaaagtgtatgtctttcgggggagtaaggagatttcaaaggaacag
gttttggagcaattgggtctcggcaatttgggtcggagacctggtccaattggtggcgga
gggtaccagctgaagggggtacaaaatgggcttcccagtgctggtgtgacccggttcttg
ttgcccgcttcggattgcgaatacacactgaacacgttgttggatgaattgcaaacggac
cagtggcctgtgccgcaaggaagccgtgcttccaggtgcacaggagtggcattgagtgtt
gctgccgggttacttggagcttgtgtgcctggaactggggctcgcattgtagctttggtt
ggcggtccatgcactgaagggcctggcgcgattgtatcgaaagatttgtcagacccagta
cgctcccataaggatctggataaggatgcagcaccatactttaagaaagcaatcaaattt
tatgaaaatcttgcaaagcagctggttagccaggggcatgtcttggacctatttgcatct
gcactcgatcaggttggggttgcagaaatgaaagttgcaattgaaagaactggtgggctt
gttgttctggcagaaagttttggtcattctgtattcaaagactctttcaagcgtgttttt
gaagaaggggaacagtcgcttggcctttgtttcaatggtatgcttgagatcaactgttct
aaggacataaaaattcaagggattattggaccttgcacatctttggagaagaaaggacct
gctgttgctgatactgctataggggaggggaatacaacagcttggaaaatgtgtggcctt
gacaagagtacttgcttgacagttttctttgatttgtcatctagtgatcagtcaaataca
ccgggaactgtaaatccacaattgtatctgcagtttcttacaagttttcaaaaccctgaa
ggtcaaatgatgcttcgagtaacaacaattactagacaatggatagatagttcagttagc
tcagaggaattggttcaaggatttgaccaagagactgctgctgtagtaatggcaagaaaa
acttccttgaaaatggagtcagaggaatcttttgatgctacacgatggttggatcgagga
cttattcgcctctgttcgaaatttggtgattatcgaaaagatgatccatcatcctttact
ttaaatccctctttctcattattccctcaatttatgtttaacctccgacgctcacaattt
gtgcaggttttcaacaacagcccagatgaaacagcatattttcgcgtgttgttaaatcgg
gaaaatatcagcaatgctgctgtcatgatacaaccatcattaatatcgtattcatttaat
tcgctgcctcagccagcattgttggatgtggcatccattgcagccgaccgtattctcttg
ttggattcatattttagtatagtcattttccatggaatgacaatagcacagtggcgtaac
atgggataccagaatcagccagaacaccaggcatttgcacaactactgcaagctccccac
gatgatacacaattgattgttcgggaccgtttccctgtccctagattggtggtgtgcgat
cagcatggctcccaggcaaggttcttgttagcaaagttgaacccgtcagcaacatacaac
aatgcgcatgaaatggctgccggttcagatgttatcttcacagatgatgtaagccttcaa
gttttctttgagcatcttcagaggctggcagtgcaatcttga
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