Malus domestica (apple): 103400635
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Entry
103400635 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103400635
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103400635
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103400635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
zf-RING_16
zf-HC5HC2H
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
103400635
NCBI-ProteinID:
XP_070670729
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All DBs
Position
15:complement(15131640..15132947)
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AA seq
435 aa
AA seq
DB search
MIKISGFQHLDLPMFHSSLFILLLNCVIFHVESQSLGSDMDSDEETKYQRSVRTVIGVLS
VMFAFLFSLLVYAKYCHRRVPVQEHSLLETGLISRSSRFSGIDKTVIEALPFFRFSSLKG
SREGLECAVCLSKFEDIEILRLLPKCKHAFHINCIDHWLEKHSSCPLCRHKVSSEDLTFV
TFSNSMRVLSNNQSEHRQDSNIDLFVQREEDRCGSSRFSIGSSFRKSEKVVDKEAELLIA
EAACSDVTKEDDKILHKHKHKILFSAFEFNNRWSNLSSSDLMFLNSEMLNTVSSNRFSPI
KLNDEQFLTAKATGNEEIMNIREEMEMKRLFENKVSTMNKNSSATNSIVPSTSDSIATSA
HASSSTNRGDKRSMSEITALSRFGNLGFTNGTREPSLLENNPKEDRMRRLWMPIARRTVQ
SFANREKRSPQHLDV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatttcggggtttcaacatctcgaccttccaatgtttcattcaagcctgttt
attttgcttctcaactgtgtaatcttccatgttgaatcacaatccttaggctcagatatg
gattctgatgaagaaactaaatatcaacgaagtgttcgtacagttatcggtgttctatct
gtcatgtttgcgttccttttttcactcctagtttatgccaaatactgccatagaagagtt
cctgttcaagaacacagtctccttgaaacaggacttatcagtagaagctcccggttttcg
gggattgacaagacggtgattgaggcacttccgtttttcagattctcttctctcaaaggg
tcaagggaaggtctcgaatgcgcagtctgcctatcgaaatttgaagatattgagattctc
agattgcttccaaaatgcaaacatgcttttcacatcaactgcattgatcactggctggaa
aagcactcaagctgtcctctctgccggcacaaggttagctctgaggatcttacgttcgtc
accttctcgaatagcatgagggtcttgtcgaataaccaatcagagcatcgacaggactct
aacatagatctctttgttcagagagaggaagatcgctgcggttcttcgagattcagcatc
ggaagcagctttcgaaaaagcgaaaaggtggttgacaaggaagctgaactgctaatagca
gaagctgcttgtagtgatgtgacaaaagaggatgacaaaatcctgcacaagcacaagcac
aaaattcttttttctgctttcgagttcaacaacagatggagcaatctgagttcgtctgat
cttatgttcttgaattcggaaatgctcaacacggtgtcaagcaatagattctctcccata
aaactaaacgatgagcagtttttgaccgcgaaagcaactggaaatgaggagatcatgaac
atcagggaggagatggagatgaaaagattgtttgagaacaaagttagtacaatgaacaaa
aacagttcagctacaaactcaattgttccctctacatcagacagtatagcaacttcagct
catgcctcgagttctacgaatcgaggagataaaagatcaatgtccgaaatcactgctctt
tctagattcggaaacttgggtttcaccaacgggactagagagccttctctgctcgaaaac
aacccgaaagaggataggatgaggcggctttggatgccgattgccagaagaacagtccag
tcgtttgccaatagagagaaaaggtctccacagcatttagatgtatga
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