Malus domestica (apple): 103400808
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Entry
103400808 CDS
T03194
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1
KO
K14848
ribosome assembly protein RRB1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103400808
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103400808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
WDR55
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
PALB2_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103400808
NCBI-ProteinID:
XP_008337702
LinkDB
All DBs
Position
15:complement(join(16351264..16351392,16351475..16351592,16351714..16351829,16351948..16352020,16352127..16352266,16352402..16352508,16352631..16352796,16352902..16353000,16353108..16353369,16353708..16353871,16353979..16354026))
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AA seq
473 aa
AA seq
DB search
MVRSIKNPKKAKRKAKGSKKGDGSSSSSGPSMPAKVWQPGVDKLEEGEELQCDPSAYNSL
HAFHIGWPCLSFDIVRDTLGLVRTEFPHSVYFVAGTQAEKAAWNSLGIFKVSNISGKKRE
PVPAKAADDDSNMDSEDSDSDDDSEDEESSGSGAPVLQLRKVAHEGCVNRIRAMTQNPHI
CASWADTGHVQVWDFSSHLNALAESETEASQGASSVFNQAPLVKFGHKDEGFALDWSPLV
PGRLLSGDCKNCIHLWEPTSGSTWNVDTTPYIGHIASVEDLQWSPTEPDVFASCSVDGNI
AIWDIRIGKAPATSFKAHNADVNVMSWNRLASCMLASGSDDGTFSIRDLRLLKEGDSVVA
HFEYHKHPITSIEWSPHEASTLAVTSSDNQLTIWDLSLENDEEEEAEFKAKTKEEVNAPK
DLPPQLLFVHQGQKDLKELHWHTQIPGMLVSTAADGYNILMPSNIQTTLPSEL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaagcatcaagaaccctaagaaagccaaaagaaaggccaagggctcaaagaaa
ggagatgggtcttcttcctcttcgggaccgtcgatgccggcgaaggtatggcaaccggga
gtggacaagttggaggagggcgaagagctccagtgtgacccatcagcttacaattctctc
catgccttccatattggttggccttgtttaagctttgatattgtacgggatacgttgggg
ttggttcggacagagttcccccatagtgtgtatttcgttgctgggactcaggcagagaaa
gctgcttggaactctcttggaatatttaaagtatctaacatttctgggaaaaagcgcgag
ccagtgccagccaaagctgcagatgatgactctaatatggatagtgaggacagtgatagt
gacgatgatagcgaggatgaggagtcaagtggatctggcgcacctgttttgcagttgcgc
aaggtagctcatgaaggatgtgtgaatcgtatacgcgccatgacacaaaatccacatata
tgtgcatcttgggcagacactggtcatgtgcaggtttgggacttcagttctcatttaaat
gccttagccgagtcagagaccgaagctagccagggagcttcttcagtatttaaccaggct
ccattggttaaatttgggcataaggatgaagggtttgctctagactggagtccccttgta
cctggaaggcttctatctggggactgcaagaattgtatacatttgtgggaacctacatct
ggttcaacatggaatgttgatactaccccatatattggacatattgcaagtgtggaggat
ttacaatggagtcctacggaacctgatgtctttgcctcttgttctgtcgatgggaatata
gcaatatgggatatacgcatagggaaggcaccagcaacttcttttaaggcgcataatgct
gatgtgaatgttatgtcttggaataggctggctagttgtatgctggcatctggaagtgat
gatggcaccttttccattcgtgatcttagattgctgaaggaaggagattctgtagtggca
cattttgaataccataaacaccctatcacctccatcgagtggagtccacatgaagcatcc
actttggctgtgacatcttctgacaatcagctgacaatatgggatctttctttagaaaat
gatgaggaggaagaggcagaattcaaagcgaagacaaaagaggaagtgaatgctccaaaa
gatttacctccacagcttttatttgttcatcagggacaaaaggacttgaaagaacttcat
tggcacacacagattcctggcatgctcgtttcaactgcggcagatggttataatattctg
atgccttcaaacatacagactacccttccctctgaactctga
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