Malus domestica (apple): 103400827
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Entry
103400827 CDS
T03194
Name
(RefSeq) eukaryotic initiation factor 4A-11
KO
K03257
translation initiation factor 4A
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103400827
03012 Translation factors [BR:
mdm03012
]
103400827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdm04147
]
103400827
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103400827
mRNA cycle factors
Stress granule specific factors
103400827
Translation factors [BR:
mdm03012
]
Eukaryotic type
Initiation factors
eIF-4
103400827
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103400827
Exosomal proteins of bladder cancer cells
103400827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Flavi_DEAD
DUF2780
Motif
Other DBs
NCBI-GeneID:
103400827
NCBI-ProteinID:
XP_008337727
LinkDB
All DBs
Position
15:complement(join(16827335..16827970,16828465..16828895,16829071..16829177,16829335..16829399))
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AA seq
412 aa
AA seq
DB search
MAAAPEGSQFDTRQYDTKMSELLATDGQEFFTSYDEVYDSFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTRELA
QQIEKVMRALGDYLGVRVHACVGGTSVREDQRILSNGVHVVVGTPGRVFDMLRRQSLRPD
SIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI
LVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcacctgaaggatcgcaatttgacactcgtcagtatgataccaaaatgagc
gaattacttgcaactgatgggcaggaattctttacatcatacgatgaagtttatgatagt
tttgacgctatgggtcttcaagagaatcttctcaggggaatctatgcttacggttttgaa
aaaccctcggctattcagcagaggggaattgttcccttctgcaagggtcttgatgtgatt
cagcaggctcagtctggaactggaaagacagcaactttctgttccggtatccttcaacag
cttgattatagtttgacagaatgccaagccttggttcttgcacccactcgagagcttgct
caacagattgagaaggttatgagggctcttggagactatctaggtgtaagggtgcatgct
tgtgttggtggaaccagtgtccgtgaggaccaacgcattctgtcaaatggagtgcatgtt
gttgttggaactcccggtcgtgtttttgacatgcttagaaggcagtcacttcgtcctgat
agtatcaagatgtttgttttggatgaggctgatgaaatgctttcccgtggtttcaaggat
cagatctacgatatattccagcttcttccatcaaagattcaggttggtgtgttctctgcg
acaatgccgcctgaggctcttgagatcacaaggaagttcatgaacaaacctgtgaggatt
ctagtgaagcgtgatgagctcaccctggaaggtataaagcagttctatgtcaatgtcgac
aaggaggaatggaagcttgagactctttgcgatctttatgagaccttggccattacccag
agtgtcatttttgtcaatactcgacgcaaggttgactggttgactgacaagatgaggagc
agagaccatacagtttctgccacccatggagacatggaccagaacaccagagacatcatc
atgcgggaattccgttctgggtcatctcgtgtgttgatcaccactgatcttttggctcgt
ggtattgacgtgcagcaagtctcccttgttattaactatgatctgcccacccagcccgag
aactacctccacagaattggtcgtagtggacgttttggaaggaagggtgttgccatcaac
ttcgtaacaaaggatgatgagaggatgctgtttgacatccagaagttctataacgtggtt
gtggaggagctgccatcaaacgtcgctgatctcctctga
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