Malus domestica (apple): 103400890
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Entry
103400890 CDS
T03194
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
mdm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103400890
03460 Fanconi anemia pathway
103400890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103400890
04121 Ubiquitin system [BR:
mdm04121
]
103400890
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103400890
Membrane trafficking [BR:
mdm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103400890
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103400890
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103400890
RecA family proteins
103400890
FA (Fanconi anemia) pathway
Other FA pathway factors
103400890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
Motif
Other DBs
NCBI-GeneID:
103400890
NCBI-ProteinID:
XP_008337793
UniProt:
A0A498I0B9
LinkDB
All DBs
Position
15:complement(join(18185198..18185321,18185395..18185516,18185621..18185750,18185924..18186037,18186118..18186212,18186573..18186664,18186763..18186873,18186981..18187125,18187544..18187633))
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AA seq
340 aa
AA seq
DB search
MEQQSNQKTAQQQDELQEMHHGPVPVDQLQASGIASIDVKKLKDAGLCTVEAVAYSPRKD
LLQIKGISDAKVDKIIEAASKLVPLGFTSAGQLHAQRLEIIQITSGSRELDKILEGGIET
GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAERFG
LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR
LAVRKGRGEERICKVISSPCLAEAEARFQISPEGVTDVKD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagagcaatcagaagactgcccagcaacaagacgagctccaagaaatgcac
catggccctgtccccgtcgatcaacttcaggcgtccggcatagcttccattgatgtaaag
aaacttaaagatgcgggtctttgcactgttgaagctgtcgcttactctcccaggaaggat
cttctgcaaatcaaaggaatcagcgacgctaaagttgacaagatcatcgaagcagcctcc
aaacttgtgcctttgggttttactagcgctggccagctccacgcacagagacttgaaatc
attcaaattacttctggatcaagagaacttgataagatattggagggaggaattgagaca
ggatctattaccgagatatatggcgaattccgttctggaaagacccagttgtgtcacacg
ctttgtgtaacttgccaacttcccttggatcaaggaggcggtgaaggaaaagcaatgtac
atagatgctgagggtacattcaggccacaaagactcttacagattgcagagaggtttgga
ctcaatggtgctgatgtcttggagaatgtggcgtatgctagagcttataacacggatcac
caatcaaggctcttgctcgaagcagcctccatgatggtagaaacaaggtttgctctcatg
atagtagatagtgctacagccctgtacagaacagatttctcaggaagaggtgaactttca
gcccgtcaaatgcatcttgcaaagtttctccggagccttcagaagttagcagatgagttt
ggcgtagctgttgtgatcacaaatcaagtggttgcccaagtggatggttctgcaatcttt
gccggtcctcaaattaagcctattggtggtaacatcatggctcatgcttccaccacaagg
cttgctgttaggaaaggaagaggcgaagagcgcatctgtaaagtgataagttctccttgt
ttggccgaagcagaagcacggtttcagatctccccggaaggtgtcaccgacgtcaaggac
taa
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integrated database retrieval system
