Malus domestica (apple): 103400946
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Entry
103400946 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K15082
DNA repair protein RAD7
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103400946
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
103400946
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_NXF1-5
LRR_At1g61320_AtMIF1
SAM_Ste50p
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
103400946
NCBI-ProteinID:
XP_008337867
LinkDB
All DBs
Position
15:join(17418322..17420061,17420714..17421147,17421235..17421396,17421740..17421815,17422123..17422278,17422370..17422504)
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AA seq
900 aa
AA seq
DB search
MTVLRSCDIASPKTTPPKSKTRLKLEPPTPAQTHESPTPPPTTSTSFSYQPRNPNPNFGP
NPQKGSLGLGSGSVPVSGGVMRRRSIRLASKSPGSAEMVARGGGGEEGDDRDSNGEVGFN
LFGKRIMVSGVEEGTEELKLVSGGQEKVEIREGKRGLVELGLSYDLGILRDCGEKKRKLE
IDINFPASECEGEDGASTPFLSLRSGKKVTKRGVDGGSNGAMVIDLDADEHGTVTREDEV
GRGERAKRKLGESGSVVNGVDVVELDSDSDSDAERASENVLKSSNPKGKMKLSDVIEDFE
GDPTPSENGTEKGRRRYSSKEKGKGKLVGEAVLLSGNDEVELGVKSEGFSSVDNVFTVPI
HIGDNVAVDNVFSSQIHMEENVALHDQGQVNNSNTNTRENVSDGNVYMERFREIARRNAA
RFAYFSAEEEQVNHLPPDAEVAQDIEDWPGPFSTAMKIIKDRAEKDVPVPSNKTKQSSVN
WVPKKFPDRPLPKILVPSLQDLCLLVLAKNADAIVSLDHVADALRHRLSQMLCDSRKMNS
HLFELFVQGSPTEVRLRDCSWMTEEQFKDSFQQCDTTNLTVLQLDQCGRCMPDYILHSTL
ARSSNCLPNLVTLSLSGACRLSDIGLGELISSAPALRSLNLSQCSLLTYSSISTLADSLG
SVLKELYLNDCQGIDAMLMLPALKKLERLEVFSLAGFENVYDSFIREFITACGHSLKELV
LTDCVKLTDSSVKVIAETCSGLCVLDLANLNKLTDSTLGYLANGCRAIQTLNFRRNPFSD
EAIAAFLETSGECLQELSVNHIQMVGHNTAVSLAKRSRMLHTLDLSWCRNITDEALGLIV
DSCLSLRILKLVGCTQITDTFLDGHSNPEVRIIGLKFSPILEHLKVPNPHEGPLRYSAVY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgacggttcttaggtcctgcgacattgcctcccccaaaacgacgccgcctaagtccaag
actcggctcaaattagagccccccacgccagcccagacccacgagtcccccactcctcca
cctaccacttcgacctccttctcctaccaaccccgaaaccctaaccctaattttggcccc
aatccccaaaaaggatctctcgggttgggctccggttcggtccctgtctcgggaggagtg
atgcggcggcggagtatacgtctcgcttccaagtctccgggttctgccgagatggtggcc
agagggggcggcggggaagaaggtgacgatcgtgattcgaatggagaggtgggttttaat
ctgtttgggaagaggattatggtttcgggagttgaggaagggactgaggagttgaaattg
gtttctggaggacaggagaaggtagaaattcgagagggtaagaggggtttggtagaatta
gggctgagttatgatttagggattttgagggattgcggtgagaagaaaaggaagttggag
atcgatattaattttccggcttccgaatgtgaaggggaggatggagcgagtacgccgttt
ttgagtctgcggtcagggaagaaagtgacgaaacggggtgtggatggtggtagtaatgga
gctatggtgattgatttagatgctgatgagcatggtaccgtgactagggaagatgaagtt
ggaagaggagagagagcgaagagaaagttgggggagagtggttctgtagtcaatggtgtc
gatgtggtggagttggattcggattcggactcggacgcggagagggcaagtgagaacgtg
ttgaagagtagtaatccaaaagggaagatgaagttgagtgatgtgatcgaagacttcgaa
ggcgacccgactcccagtgagaatggtacagaaaagggcagaaggagatacagcagcaaa
gaaaaaggaaaagggaaattggttggagaagcggttttattgagtggtaacgatgaagtt
gaattgggtgtgaaatcagaaggttttagttcagttgacaatgtgtttacggttcctatt
catataggagataatgtagcagtggacaatgtattttcgtctcagattcatatggaagaa
aatgttgcattgcacgatcaagggcaggtaaataacagtaacactaatacaagagagaat
gtatcagatggaaacgtatacatggagcggtttcgcgaaatagctaggcgaaatgcagct
cgatttgcatacttttctgctgaagaggaacaggtgaatcatttgcctcctgatgctgaa
gtggcacaggatatcgaagattggcctggtcccttctctacggccatgaaaattattaag
gatcgagcagaaaaagatgtgccagtgccctctaacaagaccaaacaatcatcagtgaat
tgggttcctaagaagtttccagatcgtcccctcccaaagattttggtcccctcactgcaa
gatctgtgtttgttggttctcgctaagaatgctgatgcaattgtttcacttgaccacgtg
gcagatgctttgaggcaccggctaagtcagatgctttgtgattctcgaaaaatgaacagt
catttattcgagctttttgttcagggatctccaacagaggttcggttacgggattgctca
tggatgacagaggagcagtttaaagactcttttcagcagtgcgacaccaccaatttaaca
gtgctacaacttgatcagtgtgggcgctgtatgccagattatatattgcattctacttta
gctcggtcatcaaattgcttgcctaacctagtcactttatccctaagtggtgcgtgccgt
ctttcggatattgggcttggtgaacttatatcttctgccccggcactaagatctctaaac
ctcagccagtgctctcttctcacttactcgagtattagcactttagctgattcattggga
tcagttctgaaggaactttatctaaatgattgccagggcattgatgctatgcttatgcta
ccagcactcaagaagcttgagcgtttggaggttttttcgctagcaggctttgaaaatgtt
tatgacagttttattagagaatttattacagcttgtggtcacagtttgaaggagcttgtt
ctgactgattgtgtaaaattaacagattcttctgtgaaagtgatagctgaaacctgttcg
ggattatgtgtacttgaccttgctaacttgaacaaattgactgattctactttaggatat
cttgcaaatggttgccgagcaattcaaacattaaattttcgtcggaatccattcagtgat
gaagccattgctgcattcctggaaacttctggagaatgcttacaggaactttcagtaaat
catatccagatggtcggccacaacacagccgtatcacttgccaaacggtcaaggatgttg
cataccctagatctatcatggtgccggaatattacagatgaggccctgggtttaatcgtg
gacagctgcctatcactgagaatactaaaacttgttggatgcacccagatcacagatact
tttctggatggacactcaaatccagaggtgagaatcattggcttgaaattttctccgata
ctggaacatctcaaggtccccaatcctcacgaaggtccattgcgttattccgccgtctat
tga
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