Malus domestica (apple): 103401002
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Entry
103401002 CDS
T03194
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
mdm
Malus domestica (apple)
Pathway
mdm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103401002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103401002
03051 Proteasome [BR:
mdm03051
]
103401002
Membrane trafficking [BR:
mdm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
103401002
Proteasome [BR:
mdm03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103401002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
Ubiquitin_2
STI1-HOP_DP
UBA_7
Ddi2_HDD
XPC-binding
HEAT_HEATR1
GerD
TBK1_ULD
Rad60-SLD_2
Dsc3_N
Med31
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
103401002
NCBI-ProteinID:
XP_008337922
LinkDB
All DBs
Position
15:complement(join(18951160..18951308,18951386..18951475,18951744..18951772,18952239..18952303,18952557..18952670,18952745..18952974,18953520..18954275,18955117..18955360))
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AA seq
558 aa
AA seq
DB search
MGGGSEGSVDDAAQSDGGHGVKVNVNVKCSNGSKFTVQIGLESTVGSFKEVLSPKCDIPA
NQQRLIYKGRILKDDQTLQSYGLEADHTLHLVRASANTGVATNAGAANSTQARGVRSSEG
SGTLGGSGFGTLPSLGLGLNGNGMGGAGGLFGAGFPEFDQMQQQMTQNPNVMRDIINMPA
IQNIMNNPDIMRNLIMNNPQMREVIDRNPELAHVLNDPSTLRQTLEAARNPELMREMMRN
TDRAMSNIEATPEGFNMLRRMYENVQEPFMNATTMAGDAGSDGSNPFAALLGAEGGNQTR
AQSTNQSTVSSDTATGSPAPNTNPLPNPWSSAGTGVGQTNTAWSNPFGDATLQTPSGTAR
SSLAGISYPELEGAFGAMPQDSNLLNQLMQNPAVSQIMQSLLSNPEYMNEILGSNPQLRS
MLDSNSYLREMMQNPEFLRQLASPETMQMLLTLQQSLLSQLGRQQQQSTQEPGQTGANTG
ILNNMGLDALMNMFGGLGTGNLAVPNRPDVPPEELYAAQLSQLQEMGFFDRQENIRALMA
TAGNVHAAVERLLGNLGR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggaagtgagggttctgtggacgacgctgcccaatccgacggcggacatgga
gtcaaggtcaacgtcaacgtcaagtgctctaatggctccaagttcaccgttcagattggc
ctcgaatccaccgttggatcgttcaaggaagtcctctcgccgaaatgcgacattccggcc
aatcagcagcggctgatttacaagggccggatcttgaaggacgatcaaacgctccaaagc
tacggtttggaggcagatcacactcttcacttggttcgtgcttcagcaaacacgggtgtt
gcaaccaatgctggagctgcaaattctacccaagcaaggggtgttagatctagtgaaggc
agtgggacactaggagggtctggttttggaaccttgccatcccttggacttggacttaat
ggcaatggaatgggtggtgctggtggtctattcggagctgggtttcctgaatttgaccaa
atgcagcaacaaatgactcagaaccctaacgtgatgagagacataattaacatgccagcc
attcaaaatattatgaataacccagacataatgcggaacttgattatgaacaaccctcaa
atgcgtgaagttattgatcgaaatcctgagctagcacacgtgcttaatgatcctagcacc
ctccgtcagacacttgaagcagcaagaaaccctgagcttatgcgtgagatgatgcgcaac
actgacagagccatgagcaacattgaagccactcctgagggatttaatatgctcagacgc
atgtatgagaacgtacaagagccgtttatgaatgcaacaactatggctggagatgctgga
agtgacggttcaaacccatttgcagctcttttgggggccgaaggtggcaaccaaaccaga
gctcagtccactaaccaatcaacagttagttctgatacagcaactggttctcctgctcca
aatactaacccacttcctaacccatggtcctctgctggcactggtgttggtcaaactaac
accgcatggtcgaatcctttcggggatgctacgctacagacaccgtctggcacagctaga
agtagcctagctggaattagctacccagagttagaaggagcatttggtgccatgccgcag
gatagcaatttactgaatcaattgatgcaaaatccagctgtttctcaaattatgcaaagc
ctcctctctaatcctgagtatatgaacgagattctaggttccaacccccagttacgcagc
atgcttgactccaattcttatttaagagagatgatgcaaaacccagaatttcttcgtcag
ttggcttctcctgagactatgcagatgctcttgactttgcagcaatcacttctgtcgcaa
cttggtcggcaacagcaacagtcaacccaggaaccaggtcagactggtgcaaacacagga
atattaaataacatggggttagacgcgctgatgaatatgtttggcgggcttggcactggc
aacctggctgttcccaatcggcctgatgtgccacctgaagaactttatgctgcacagctt
tcacaacttcaggagatgggtttctttgatcgacaagagaacatacgggctctgatggcc
actgcaggaaatgtacatgcagcagtggagcggcttttggggaatttgggacgatag
DBGET
integrated database retrieval system
