Malus domestica (apple): 103401169
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Entry
103401169 CDS
T03194
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103401169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103401169
Spliceosome [BR:
mdm03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
103401169
Complex B
103401169
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
103401169
NCBI-ProteinID:
XP_008338106
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All DBs
Position
15:complement(join(22292795..22293515,22293847..22293918,22294206..22294368,22294448..22294529,22296533..22296595,22296689..22296753,22296841..22296916,22297013..22297092,22297202..22297316,22297575..22297676))
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AA seq
512 aa
AA seq
DB search
MGDFNNDAFMRGQNAAVQGRTKAQNRQNVLQLKMIGQSHPTGLTTNLLKLFEPRLPLDFK
PPPEKKKCPPLTGVAQFVSKFAEPGDPEYNPPVQKGETPTQRRARIHQLRLEKGAAKAAE
ELEKYDPNNDPSISGDPYKTLFVARLNYETTESRIKREFDVYGPIKRVRLVADKETNKPR
GYGFIEYMHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE
DVNQKYSGREQVQSGGQSRSEEPRVREERHVDLDRQKSRERGKEKEKEREREKSRERSHD
KSRDRDHREDRHHRDRDRNRDKDRDRERDRGRDRDRTRERGRDRGRDYEHGRDRDRDRDR
ERDRDRRSRDRERDDEVGDPEHDRGHSHERIESKHERVRHGERERGYDHTAQEDDQGWFE
QPGHGHRRSEPDDDDKPYERHCSQYDQLDVQHDDDRYKQYPDHAHDRYDQMEEDDYRYEQ
APAESRERERGGDVERDYRRSSRSLSRDYNEY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttcaacaacgatgctttcatgcgcggccaaaacgccgccgttcagggccga
accaaggcccagaaccgccaaaatgttcttcagctcaagatgattgggcagagccacccc
accggtctaacaacaaaccttttgaagctctttgagcctagactgccgttggatttcaaa
ccgcctccagagaagaaaaagtgcccacctttgacaggggtagcgcaatttgtgagtaag
tttgcggagcccggagatcctgagtataatccgcctgtccaaaagggcgaaactcctaca
cagagaagggctcgaatacaccagctaagacttgagaagggtgcagcaaaggctgcggaa
gagctagagaaatatgatccaaataatgacccaagtatttctggagatccatacaagact
ttgtttgttgcaagactcaattacgagacaactgagagcagaatcaaaagggagtttgac
gtttatggtccaatcaagcgggtccgattggtcgctgacaaagaaacaaataaacctaga
ggctatggattcattgagtacatgcatacaagggacatgaaagctgcatacaaacaagct
gatgggaggaagattgagggaagaagggtacttgttgatgttgaacgtggaagaacagtt
ccaaactggcgaccccgccgactgggtggtgggcttggaaccaccagagttggaggtgaa
gatgtcaatcagaaatattctggaagggagcaagtacaatccggaggacaatcccggtct
gaggagccaagggtacgcgaggagcgacatgtagacttggatagacaaaaatcccgtgaa
aggggaaaagagaaagaaaaggaaagagaaagggaaaagtcccgcgaacgctcccatgac
aagtctagagaccgtgatcacagggaagatagacaccacagagaccgtgatagaaacagg
gacaaggacagggatagggaaagagatcgtggtcgtgatcgggaccgtactcgtgaacga
ggacgggatcgtggtcgcgactatgagcatggtcgtgatcgagacagagaccgtgatcgg
gagcgtgatcgtgatcgtcgctctagagacagggagagggatgatgaagttggggaccct
gagcatgatcgtggccattcccatgaacgtattgaatcaaaacatgagagggtccgacat
ggggagagggagcggggttatgaccacactgcccaagaagatgaccagggttggtttgaa
caacctggacatggccataggcgctcagagcctgatgatgatgataagccctacgagcgt
cattgtagccagtatgatcaattggatgtccagcatgatgacgaccgctacaaacaatat
cctgaccatgctcatgaccgctatgatcaaatggaagaggatgattaccgttatgaacaa
gcaccagctgagtcccgtgaaagggagaggggtggagatgtggagcgtgattatcggagg
tcatctagatcactctctcgggattacaatgagtattga
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