Malus domestica (apple): 103401177
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Entry
103401177 CDS
T03194
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103401177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103401177
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103401177
Prokaryotic type
Archaeal type
TFB
103401177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
103401177
NCBI-ProteinID:
XP_008338121
LinkDB
All DBs
Position
15:complement(join(22349889..22350662,22351283..22351441,22351595..22352191))
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AA seq
509 aa
AA seq
DB search
MRCPYCSTGQARCATTTNSRRSITECTLCGRVVEERQSQFHHLFHLRAQDNPLCLVTSDL
PTLPHTQQPNDADDEDPFLPAGFITAFSTWALEPNPLFLRSSLSFSGHLAELERTLESTS
SSSTSSSSSTVVVDNLRAYMQIIDVASILGLENDISDHAFQLFRDCCSTTCLRNRSVEAL
ATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPR
FCTLLQLNKSAQKLATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKV
TGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSSSKVDFVDLPLY
LEREKLLERKPNKPNEGLDMNIPPPVCKEEYERKGNSQGPMNQSTTFWQSQVPYGTSDLK
TAGQKYENGVEGMDTEEPQPNQQPNPTHTINPPSSGACPVTRQFRCPSTSSPSPNVMYVL
PPKLAPGYTELRSSGGQNGSESGRHSGEA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccctactgctccaccggccaggcacggtgcgcgacgacaaccaactcccgt
cgttcgataacggagtgcacgttgtgcggccgtgtggtggaagagcgccaatcccaattc
caccacctcttccacctccgtgcccaagacaaccctctctgcctcgtcacctccgacctc
cccaccctcccccacacccagcaacccaacgacgccgacgacgaagaccccttcttgccc
gccggcttcatcaccgccttctccacctgggccctggagcccaaccctctcttcctccgc
tcctccctctccttctccggccacctcgccgagctggaacgcaccctcgaatccacctcc
tcctcctccacatcctcgtcgtcgtccaccgtggtggtggataatctgagggcctacatg
caaatcatcgatgtcgcttcgattctggggttggaaaacgacatctcggaccacgcgttt
cagctcttcagggactgctgctccaccacttgcttgcggaatcgcagcgttgaagctctc
gcgactgctgctctggtccaggctatcagagaggcccaagagcctagaaccctccaggaa
atctccattgctgcaaatgtgccccagaaagaaattggcaagtacattaagatacttgga
gaagcactgcagcttagtcagcccatcaacagcaattcgatatcggtgcatatgccgcgg
ttttgcactctcctccagctcaataaatctgctcagaaactggcgactcacattggagag
gttgtcatcaacaagtgcttctgcacgcgtaggaaccccattagtatctccgcagctgca
atatatttagcctgccagcttgaagacaagagaaaaactcaggcagagatttgtaaggtg
actggtcttactgaagttactctccgaaaagtctacaaggagctcttggagaactgggac
gacttgctcccatctaattacactcctgcagttcctccagaaagagcattccctaccact
gtaatcgcttcaggccgttcttcatcatctaaagttgattttgttgatttaccactttat
ttggagagggaaaagctgcttgaaagaaaaccgaacaagccaaacgagggattagacatg
aacattccaccacccgtatgtaaagaagagtatgagcgtaaaggtaattctcaaggtccg
atgaatcaatcaactactttctggcaatcccaggttccatatgggacttctgatctaaag
acggcgggacaaaagtatgagaatggtgtggaaggaatggacacggaagagccccaacct
aaccaacagcctaatccaactcatactataaaccccccaagttcaggtgcatgtccagtt
accaggcagtttcggtgcccatctacatcaagtccttctccaaatgtgatgtatgtgctg
ccgccgaagctggcacctggttataccgagcttagaagcagcggtggacaaaatggaagt
gaaagtggcagacacagtggggaggcctag
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