KEGG   Malus domestica (apple): 103401181
Entry
103401181         CDS       T03194                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103401181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103401181
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103401181
 Complex B
    103401181
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 103401181
NCBI-ProteinID: XP_008338125
UniProt: A0A498I168
LinkDB
Position
15:complement(join(22438224..22438361,22438464..22438531,22438809..22438950,22439095..22439541,22439667..22439779,22439867..22439927,22440060..22440119,22440225..22440272,22440618..22440688,22441329..22441402,22441978..22442097,22442341..22442666,22443428..22443562))
AA seq 600 aa
MMTDYEGRYEGNGEDPGNYADGGSPPQPRAANHGGADDYSDSKSQHEYHDYERESSKSRE
KDRDKGRDKEKDRDRDRDRDRGRSKDKDKERDKDRDRDRARERDRNRDRERERDRDRDRD
RHHRDRHRDRERSERRRDKDDDGDDHYRTRDSDRRRDYDRDREDRHRRKSRSRSRGRSEH
KSRSRSRSRSRSKSKRISGFDMAPPASAMLAGAAVAAAGQIPGTSPTIPGMFPNMFPLST
GQQFAPLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGD
AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ
PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIKELLESFGPLRGFDLVKDRE
TGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPEQESVLLHAQQ
QIALQRFMLLQPPSSVATKVVCLTQVVTADELRDDTEYDDILEDMRLEGEKFGTLVNVII
PRPRPNGELAPGVGKVFLEYADTEGSTKARTGLNGRKFGGNQVVAVFYSEDKFGEGDYEG
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgatgacggactacgaaggaaggtacgaaggcaacggagaggaccctggcaactacgcc
gacggtgggtcccctcctcaacctcgtgccgccaaccatggcggtgccgacgattacagt
gattccaaatctcagcatgaatatcatgattatgagagagaatcttcaaagagcagagaa
aaggatagagataaagggcgtgataaggagaaggacagagatagggacagggacagggac
agggggagaagcaaggacaaggataaggaaagggataaggacagggacagagatagggct
agggagagggataggaatcgggatagagaaagagaaagggaccgagacagggatcgtgat
cgtcatcacagagaccgccacagggatcgtgaaagaagtgagcgacggagagataaggac
gacgacggcgatgatcactaccgtacccgggactctgataggcgaagggattatgacaga
gacagagaggataggcacaggcgcaagtcgcggtctcgttcaaggggtagatctgagcac
aaatccagatcaaggtcacgttctcgttcacgttcaaaaagcaaaaggatcagtggtttt
gacatggcacctcctgcttctgcaatgttagctggtgctgctgttgctgcagcagggcaa
attcctgggactagtcctaccattccggggatgtttccaaacatgttccctttgtcgacc
ggtcagcagtttgcaccccttccagttatgcctgttcaggcgatgactcaacaggctact
aggcatgcccgacgggtgtacgttggaggtcttcccccaacagcaaatgaacagtcagtt
gctacatttttcagccaagttatggctgcaattggagggaacactgccggcccaggagat
gctgttgtcaatgtttacataaaccatgaaaagaaatttgcttttgtggagatgagatcg
gttgaagaggctagcaatgcaatggctctggatggaattatttttgagggagcccctgtt
aaggtgcggagacctagcgattacaacccatctctggctgcaacactcggcccaagccag
cccaatcccaatctgaacctggctgctgtggggcttacaccgggttctgctggtgggctt
gagggccctgaccgcatatttgttggtgggctgccatattacttcacagaagcacagatc
aaggaattacttgaatcctttggacctcttcgtggttttgatttagtgaaagacagggaa
acaggaaactcaaaaggctatgccttttgtgtttaccaagatctttcagttacagacata
gcttgtgcagcactgaacggcattaaaatgggcgacaagacgctcacagttaggcgtgct
aaccaaggtgccaaccagcccaaacctgagcaagagagtgttctgttgcatgcacagcag
caaattgcattgcagaggttcatgttgttgcaaccgcctagttctgtcgccaccaaggtt
gtatgtttaactcaggtagtaactgcagatgagcttagggacgatactgagtatgatgat
atcttggaagacatgaggcttgaaggcgaaaagtttggtacattagtgaatgtcatcatc
ccgcgtccaagaccaaatggtgaacttgcccccggtgttgggaaggtgtttttggagtat
gcagatactgagggttctacaaaagcccgtacggggttgaatggccggaaatttggtggc
aatcaggtggtagcagtgttttattcggaggacaagtttggtgagggcgactacgagggc
tag

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