Malus domestica (apple): 103401711
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Entry
103401711 CDS
T03194
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103401711
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103401711
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Zn_ribbon_Elf1
HVO_0758
DUF2250
Motif
Other DBs
NCBI-GeneID:
103401711
NCBI-ProteinID:
XP_008338654
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All DBs
Position
01:join(27065256..27065411,27065921..27066904)
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AA seq
379 aa
AA seq
DB search
MEKDLLELFDAVKKSADAATSCDGGAEESECLEAFEQLNNFPVTHQILVSTQVGKRLRHL
TKHPRKKIQSVASGLLEKWKEIVMSEVGKNVKNGNLERIDSLKRDSPRADSPRPEKVQKT
SAVKVEKVSKAEPVEVKKVDRDVKPSSEKAYSSGTVKAERKVQNVNPVKTEKAASVENVK
DEKVAKDVKKPALNSSGPPKLTSMIKCNDTARDKVRVLLHEALSKVSEEGDERFVDEVNA
ADPIRVAVTVESVLFENWGGSTGSQKAKYRSLIFNLKDQKNPDFRRKVLLGHIEAERLVD
LSTAEMASDQRQEENQKLEQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQMQTRSAD
EPMTTYVTCVNCNNRWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatcttctggagctgttcgacgccgtgaagaaatcggcggacgccgccaca
tcttgcgacggaggagccgaggaaagcgaatgccttgaggccttcgagcagctcaataat
tttcccgtcactcatcaaatcctcgtctcaacccaagttggaaagcgtcttcgacatctc
acaaaacatcctagaaaaaaaatacaatcggttgcttcaggccttttggagaaatggaaa
gagattgttatgagcgaggtagggaaaaatgtgaaaaatggaaacttggaaagaatagac
tctctaaaacgtgattctccacgtgccgacagccccaggcctgagaaggttcagaagaca
tctgctgtgaaggttgagaaggtttccaaggctgaacctgttgaggttaagaaggttgat
cgtgatgtcaaaccaagctctgagaaagcttatagttccggaactgtcaaagcagaaaga
aaggttcaaaatgttaatcctgtcaagactgagaaagctgcttcagtggagaatgtgaag
gatgaaaaggtagccaaagacgtgaagaaaccagcactgaactcttctggtcccccaaag
ttaacctctatgattaagtgtaatgatacagctcgggacaaagtgagggtactgctgcat
gaggctttgtccaaggtttctgaggagggtgatgaaaggtttgtggatgaggtgaatgca
gctgatcctattcgagttgctgtcactgtggaatctgtgctgtttgagaactggggtggt
tccaccggctcccagaaggctaagtatcgatctttgattttcaacctgaaggaccaaaag
aatccagatttccgcagaaaagttctgcttggacatatcgaggcagagaggctcgtggac
ctgtcaacagcggaaatggcaagtgatcagaggcaagaggagaaccaaaagcttgaacaa
aaagcattgtttgagtgcgagcgtggaggtgcaccaaaagccacaaccgatcaattcaaa
tgcggtcgatgtggacagcgcaagaccacttactaccaaatgcagacccggagtgcggat
gaacctatgacaacgtatgtaacatgtgtaaactgcaataatcgttggaagttctgttag
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