KEGG   Malus domestica (apple): 103401966
Entry
103401966         CDS       T03194                                 
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mdm04121]
    103401966
Ubiquitin system [BR:mdm04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103401966
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 103401966
NCBI-ProteinID: XP_070669671
LinkDB
Position
15:complement(join(47748200..47748287,47748602..47748729,47748826..47748896,47748987..47749082,47749613..47749703,47750502..47750854,47751710..47751821,47752887..47752997,47753098..47753268,47753400..47753545,47753811..47753916,47754411..47754528,47754622..47754737,47756439..47756567,47756715..47756822,47756913..47757047,47757533..47757610,47759000..47759068,47759181..47759252))
AA seq 765 aa
MEGVPFHDGNIHDLIARRYVDVRHDANHRLQMHSSLVRRLSQERELEGHQGCVNSIAWNS
NGSLLMSGSDDTRINIWSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLSGRGTDDNTISPSAVYQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG
TSCPPAGSTNQECRNVLLDLRCGAKKSLADPPKQNFSLKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLTSCRKRTAPPPCVNYFCPMHLSERGRASLHLTHVAFSPDGEEVLLSYSG
EHVYLMNVNHAGESAMQYTSGDVLKLTSFSPILNGVELHQPASNVFRNGLPKRGNVAARF
EKCRNLIEIAERALEEGTDYFYGIEACNEVLDGNGCDIGPTLKHDCLCIRAALLLKRKWK
NDVHMAIRDCYNARRLISSSYRAHYYMSKALSQLAKHKEALEFAIAAQSLAPSNSQVAER
LERVQRDLAAAESERNSKPNDGAPRSEPRGERVLSLSDILYRSEGNSDVSQDGPRSERED
SDYDEELELDFETSISGDEEHDIEPNIVQGSLNLRIHRRSDSAREVGGANGPSGSPSSSS
QNERIPYQPEAVIDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFVWEKRTGR
LIKMLQGDEAVVNCVQCHPVDCVVATSGIDNTIKIWTPSASVPSIVAGGAAGPENANISV
VMESNQRRLSHNRETILYSRSEILEHFRMHEFAEGSLHPFECAQS
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggaaggcgtcccttttcacgacggcaacatccacgacttgattgcgagacgatacgtc
gatgttcggcacgatgccaatcacaggttgcagatgcactcgtcgttggtgcgaaggctt
tctcaggaaagagaattggaggggcatcaaggttgtgttaattccattgcttggaattcg
aatggctcgcttttaatgtctggatcagatgacacacggataaatatctggagctactct
agtcggaagcttttgcattctatagagactgggcacagtgcgaacatattttgtacaaaa
tttgtccctgaaacttctgatgagcttgtggtctctggagctggagatgcagaagttcga
ttatttaatttgtctcgtttaagtgggagaggaactgatgataatactatttctccatca
gctgtgtatcaatgccatagtagaagagtaaaaaagttagctgttgaagttggaaatccc
aatgtggtatggagtgcaagtgaagatggaactttgagacagcatgacttccgagagggc
acttcttgcccacctgctggatccactaatcaagaatgtcgcaatgttttgcttgacttg
cggtgtggagcaaagaagtcacttgctgatccccccaagcaaaatttttctttaaaatct
tgtgatatcagttccactagacctcatttactcctagttggtgggagtgatgcatttgcc
cgtttatatgatagaaggatgctgccaccactgacatcctgtcggaaacggacagctcca
cctccttgtgttaactatttttgtccaatgcatctctccgaacgtggacgtgctagcttg
catttgactcatgttgcatttagtccagatggagaagaggttctacttagttatagtggg
gagcacgtatatttgatgaatgtaaatcatgctggtgagagtgctatgcagtatacttct
ggagatgttttgaaactaaccagcttcagtcctatactcaatggtgtcgaactgcatcaa
ccagcatccaatgtgttcagaaatggtcttcccaaaagaggcaacgttgctgctaggttt
gagaagtgcaggaatctaattgaaattgctgagcgagccttggaggaggggacagattat
ttttatggcattgaagcgtgcaatgaggtgttggatggaaacggttgtgatattgggcct
acactaaagcatgattgcctttgtattcgtgcggcattgttgcttaagcgcaagtggaaa
aatgatgttcatatggctataagagattgttataatgctcggaggctcattagctcctct
tacagagctcattactatatgtccaaagctttgtcgcagttggctaaacataaagaagct
ctggaatttgctatcgcagcccaatctttagctccatcaaattctcaagtagcagaacga
ttggagcgtgtacaaagggatcttgctgcagctgaatctgaaagaaatagtaagccaaat
gatggagcacccaggtctgaacctcgaggtgaaagagttctatctctgagtgacatactc
taccgatcagagggtaatagtgatgtttcacaagatggtccaagatctgaaagagaagat
tctgattatgatgaggaactagagctggactttgaaacgtcgatctcaggtgatgaagag
catgacatcgagcccaacattgtacaaggaagcttaaacttgagaattcatcgaagaagt
gattctgctagagaagttggtggtgcaaacggcccatctggatccccttcttcgtcatct
caaaatgaaagaataccatatcagcctgaggcagttattgatatgaaacagagatatgtt
ggccattgtaatgttggaacggacataaaacaggccagctttcttggccagcgaggtgaa
tatgttgctagcggaagtgatgatggcagatggtttgtctgggagaagcgaactggtaga
ctgataaaaatgcttcaaggagatgaagctgttgtgaactgtgtacagtgccatccggtt
gattgtgttgtggcaactagtggaattgacaacacaataaaaatttggacccccagtgcc
tcagtcccatctattgtggctggtggagccgcgggaccagaaaatgctaacatttcggta
gtcatggaatccaatcagcgcagattaagccataatcgtgagactatcctgtacagccgt
tctgaaattttggagcattttcgaatgcatgagtttgctgaaggaagcttgcacccattt
gagtgtgcccagagctga

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