Malus domestica (apple): 103401984
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Entry
103401984 CDS
T03194
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mdm03012
]
103401984
Translation factors [BR:
mdm03012
]
Eukaryotic type
Initiation factors
eIF-3
103401984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
DUF6038
Regnase_1_C
Motif
Other DBs
NCBI-GeneID:
103401984
NCBI-ProteinID:
XP_008338938
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Position
15:complement(join(48013471..48014445,48015456..48017240,48017369..48017392))
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AA seq
927 aa
AA seq
DB search
MASRFWTQPGSDSEDEESDYEEEVEPTGGETTTEPGLNPYLQANASDSEDSDDQKRVVRS
AKDKRFDELSATVHQMKNAMNINDWVSLQESFDKINKQLEKVMRVTEAVKVPTLYIKALV
LLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPEQSEDDKP
PEEETDDDDASDSEIEDPTDIPSSGSEEPEEEEEDEEPTEAGWQKKMSKKDKLMDKQFSK
DPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQF
DVNPGLNGHMPINVWKKCVQNMHVILDILVKYPNITVDDMVEPDENESQKGPDYDGTIRV
WGNLVAFLERIDTEFFKSLQCIDPHTREYIERLRDEPMFLVLAQNVQEYLERVGNYKAAA
KVALRRVELIYYKPQEVYDAMRKLAEHTGESDNGEEPRAAEESRGPSSFIVVPELVPRKP
TFSESSRTMMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSTSRDLLLMSHLQDNVQ
QMDISTQILYNRAMAQLGLCAFRNGLITEAHSCLSELYSGGRVKELLAQGVSQSRYHEKT
PEQERLERRRQMPYHMHINPELLEAVHLICAMLLEVPNMAANTHDAKRRLISKTFRRLLE
VSEKQTFTGPPENVRDHVMAASRALGKGDCQKAFDVINSLDVWKLLRNREHVLEMLKAKI
KEEALRTYLFTFSSSYKTLSLEQLSTLFDLTEAQTHSIVSKMMINEELFASWDQPTRCIV
FHDIEQTRLQALAFQLTEKLSILAESNERATEARIGGGGGLDLPQRRRDNQDYGAGSVAG
SGGRWQDNMSFNQRQGGGAGRTGYNAGGRPFNQNAGGGYNRDRTGQYRGTGQNTRYQDGA
YAGSGRSARGSQDTSTRMVSLNRGPRA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgattctggactcagcctggtagcgattctgaggatgaggaaagtgactat
gaagaggaggttgaacctacgggtggtgagactaccactgaaccaggcctaaacccttac
cttcaggctaatgcaagtgatagtgaagattctgatgaccagaagcgcgttgttagatcg
gcgaaagataagcgctttgatgaattgtctgcgactgtacatcaaatgaagaatgcgatg
aatatcaatgactgggttagcttgcaagagagctttgacaagataaataagcagcttgag
aaggtcatgcgtgttaccgaggctgtaaaggtacctactctctacataaaagctcttgta
ttgttagaagactttctggcacaggctttggcaaacaaggatgctaagaagaagatgagt
agtagcaatgccaaggccttgaactcaatgaaacagaaactgaagaagaacaataagcaa
tacgaggacttaattaataaatatagggagaatcctgagcagagtgaagatgataagcct
ccagaagaggaaacggatgatgacgatgcatcggattctgaaattgaggatcctactgat
attccatcgtcaggtagcgaagaaccagaggaagaagaagaagacgaagaaccaactgaa
gctggttggcagaagaagatgagtaagaaagataagctcatggataagcaattcagtaag
gaccctagtgaaatcacgtgggatactgttaacaagaaatttaaagaggttgtggctgct
aggggcaggaagggaactggaaggtttgagcaggttgagcagcttaccttcttgacaaag
gttgcaaagacccctgcacagaagctggagatatttttcagtgttgtttctgctcagttt
gatgtgaatcctggtctcaatgggcacatgcctataaatgtgtggaagaagtgtgtgcag
aatatgcacgttatacttgatattcttgtgaagtatcctaatatcacggtggatgacatg
gtagagcctgatgagaatgaatcccagaagggaccagattatgatgggacaattagggtt
tggggaaacttggtggccttcttggaaaggatagatactgagttcttcaagagcttgcaa
tgcattgatccccacactcgtgagtacattgaaagactcagggatgagcctatgtttttg
gttctagctcaaaatgttcaagagtatttagaacgggttggaaattacaaagctgctgct
aaggtagccctaaggcgcgtcgaacttatctattataagccacaagaagtttatgatgcc
atgcgaaaattggcggagcatacaggagagagtgataatggtgaagagcctagagcagct
gaggaaagtcgtggtccatcttcatttattgttgttcccgagctcgttcctcgaaaaccc
accttctctgagagtagcaggactatgatggatatattggtttccctcatatacaagtat
ggagatgagaggactaaagctcgtgcaatgctttgtgatatttatcaccatgctctgctg
gatgagttttccacttcccgtgacttgctgcttatgagtcacctgcaagataatgttcag
cagatggacatttcgacccagatactttataacagggccatggcacaacttggtctgtgt
gcatttcgtaatggattaattactgaagcgcatagctgcctttctgaactatattctggt
ggaagagtaaaagagttgcttgcccaaggtgtatcacaaagtagatatcatgagaaaact
ccagaacaggaaaggctggagaggagacgacaaatgccttaccatatgcatatcaaccct
gagctcctggaggcggtgcatttgatatgtgccatgctgctggaagtgcctaatatggct
gcaaacacccatgatgcgaaacgcagattgatcagtaagacattccgtcggttgcttgag
gtgagtgagaagcaaacattcaccggtccccctgaaaatgttagggaccatgtaatggca
gcttccagggcccttggcaaaggtgactgccagaaggcctttgatgtcatcaattctctt
gatgtttggaagctccttaggaaccgtgagcatgttcttgagatgctcaaggctaagatc
aaggaagaagctctaaggacctatctttttaccttctcctcatcctataagactctgagc
ttggaacaactcagcacgttgtttgaccttacagaggcccagacacacagcattgttagc
aagatgatgatcaacgaagagctctttgccagttgggaccagccaacacgttgcattgtt
ttccatgacattgagcagactaggctgcaggctctagcgttccagttgactgagaagttg
tcaatccttgcagaaagtaacgaaagggcaacagaagcaaggataggtggtggcggtggg
ttagatctacctcaaaggcggagagacaaccaggactacggtgctggatcagttgctggg
agtggcggtagatggcaagataacatgtccttcaatcaaaggcaaggtggtggcgctggg
cgtacagggtacaacgctggagggagaccattcaaccaaaatgctgggggtgggtataac
agggaccgcacaggtcaatacagagggacagggcaaaacacccgttatcaagatggtgca
tatgcaggatcagggaggtccgcaaggggttctcaggatacctcaactcgcatggtcagt
ctaaatagagggcctcgcgcctaa
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