KEGG   Malus domestica (apple): 103402108
Entry
103402108         CDS       T03194                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103402108
Spliceosome [BR:mdm03041]
 Complex B
  Other components
   Complex B specific factors
    103402108
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 DUF7165 Beta-prop_WDR75_2nd VPS8_N Beta-prop_LRRK2 Beta-prop_IP5PC_F Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 103402108
NCBI-ProteinID: XP_008339070
LinkDB
Position
15:complement(join(50644735..50644833,50645834..50645885,50646294..50646394,50646578..50646685,50646817..50646876,50646970..50647096,50647446..50647573,50648622..50648717,50649052..50649105,50649194..50649280,50649585..50649688,50651311..50651394,50651931..50651979,50652445..50652597,50653704..50653914,50654284..50654312))
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQMLQSECQVSLNTVDSVETFVSDINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVVKQEQPERFLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVSVVPPSRLTALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV
WDYLSGKLKKDLQYQADESFMMHEDAVLCVEFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSKGVTSVSFSRDGSQLLSTSFDSTAKIHGLKSGKALKEFRGHSSYVNDAIFTSD
GARIITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVHLYPKNTDHIIVCNKTS
SIYVMTLQGQVVKSFSSGKKEGGDFLSACVSPKGEWIYCVGEDRNMYCFSHQSGKLEHLM
KVHEKEVIGISHHPHRNLVATYSEDCTLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctaccttagaaatcgaagctcgagatgtcatcaagattgtgcttcaattttgcaaa
gagaattctttgcaccaaacgtttcaaatgttgcagagtgagtgccaggtatctttgaac
actgtcgacagcgttgagacatttgtttctgacataaatagtggaaggtgggatgcaatt
ttgcctcaagtggctcaacttaagcttcccaggaataaattggaggatttgtacgagcag
attgtactcgaaatgattgaacttcgagaattggatactgctcgtgctatcttaagacag
actcaggtaatgggtgtagtgaagcaagaacaacctgaaagattcttgcgacttgagcac
ctccttgtcagaacctattttgatccaaatgaggcttatcaagagtcaacaaaagaaaag
cggcgtgctcaaattgctcaagcacttgctgcggaagttagtgtggtgccaccatcaaga
ttgacagctctaattggtcaggctctgaagtggcagcagcaccaaggattgcttccccca
ggaacacagtttgacttatttcggggaacagctgcaatgaaacaagatgtggatgacttg
tatccaacaactctttcacacacaataaagtttgggacaaaaagtcatgcagaatgtgcc
cggttctcaccagatgggcagtttcttgtctcttgctcggttgatggatttattgaggtg
tgggattacttaagtgggaaactcaagaaggatcttcagtaccaggctgatgaaagtttc
atgatgcacgaggatgctgtcctctgtgttgaatttagccgagattcagagatgcttgca
tctgggtcacaagatggaaagatcaaagtttggcgtattaggactgggcagtgcttgcgc
cgtcttgaacgtgcacattcaaagggtgtcaccagtgtttccttctctcgtgatggaagc
cagttacttagtacatcatttgacagcactgcaaaaatccatggcctaaaatctgggaag
gcgttgaaagaatttcgtggacattcatcttatgtaaatgatgcaatctttacaagtgat
ggagctcgtataattactgcatctagcgattgcacagtcaaggtctgggatttgaagact
acagactgtctgcagacattcaagccacctcctcctttaaggggaggtgatgcttctgtg
aattctgttcatctttacccaaaaaatacagatcacatcattgtatgtaataagacgtca
tccatttatgtcatgacacttcaagggcaggttgtgaagagcttttcatctggtaaaaag
gaaggtggagattttttgtcagcttgtgtgtcacctaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgtttcagtcaccaatctggtaaactagagcatctaatg
aaggtccatgaaaaggaggtaattggcatcagccaccatcctcacaggaatcttgtcgcc
acatatagcgaagactgcacactgaagttatggaagccttga

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