Malus domestica (apple): 103402279
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Entry
103402279 CDS
T03194
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103402279
Spliceosome [BR:
mdm03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103402279
Other components
Complex C specific factors
103402279
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
103402279
NCBI-ProteinID:
XP_017178764
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Position
15:complement(55219815..55222442)
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AA seq
875 aa
AA seq
DB search
MDDYQEMERFGMEEDYEDAQWIGGEFYYRKRKDKPVQTKDDVLYGIFTADSDDDDDNDGS
RKRRKDRRVDLTKPVSFVSTGIVMPNQEVDDNSKQQNDDKRPGLGATNGLGFGAATGSGL
GFKNPNSDSLGGEEEEEEVEDEQSFLPTAFGKKIKEGAERRHKEREKMKLLKLTSRQSQS
RGVSEERQFAGLGAKGGGDGGLGAFEKHTKGIGMKMLKNMGYKGGGLGKNEQGILAPIEA
KLRPKNMGMGFNDYKETEVKRPSLQELEAEKPSKPLPAATSTKKKPSWKKNKTNKDHYVS
AKELLAQKQEEGTEVLVHKVVDMRGPQVRVLTNLENLNAEEKAREEDLPMPELQHNVRLI
LDLAELDIQKIDRDLRNERDTAISLNQEKERLETEVARQKQHLDNLEDIRTVIDRLGEEN
SMGTLTLDSLTKGFRDLQKRYADDYKLCNLSCIACSFALPLFIRMFQGWDPLRNPSHGLD
VISSWKALLHGEGESEQYLDIWDSSMSPYTKLLSEVVVPAVRIAGVNTWQPKDPEPMLRF
LESWENLLPPSVLHSILDMVIFPKLKDAVDLWEPHRDTVPIHVWVHPWLPLLGHKLEDLY
HTIRFKLSNVLGAWHPSDGSAYTILSPWKKVFDAASWEQLMYRFIVPKLQLVLQEFQVNP
ADQTLDQFNWVMSWASAIPIHLMVDILEKFFFTKWLQVLYHWLCSNPNFEEVLNWYKGWK
ELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAA
AAAHANLGGTAQMDGIGHEMSLKDVIEAHAQQNGLLFRPKPGRMHNGHQMYGFGNVSIIV
DSLNQKVYAQTEETWSLVSLERLLDMHNNLLTRRR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttgggatggaggaggattacgaggacgcccag
tggatcggcggcgagttctattaccgcaagcgcaaggacaagcccgtccaaaccaaagac
gacgtcctctacggcatatttactgccgattccgatgacgacgatgacaacgacggctcc
agaaaacgcaggaaagaccgaagggtcgacctcaccaagcccgtcagttttgtctccaca
ggaatcgtcatgcccaaccaggaggtcgacgacaattcaaagcagcaaaacgatgataag
cggcctggcctcggcgccaccaatggccttggatttggtgccgctacgggttccggttta
ggttttaaaaatccgaattcggattctttgggtggcgaggaggaggaggaggaggtggag
gatgagcagagttttttaccgacggcttttgggaagaagataaaggagggagcggagagg
agacacaaggagagggaaaagatgaaattgctcaagcttactagtcgtcagtctcagagt
agaggagtttctgaagaacgtcaatttgcaggactaggagcaaagggcggtggggatggg
ggtctgggggccttcgagaaacacaccaagggcattggaatgaagatgcttaagaacatg
ggctacaaaggaggcggacttgggaagaacgagcaaggcattctcgctcctattgaagcc
aagctgaggccaaagaatatgggcatgggtttcaatgattacaaggagacggaggtcaag
cggcctagcttgcaagaattggaagctgaaaagccgagcaagcctttgcccgctgccacc
tccaccaaaaagaagccttcctggaagaagaacaagactaacaaggaccattatgtctct
gccaaggagttgttagcccagaagcaggaagaaggcacagaggtccttgtgcacaaggtg
gttgatatgcgcggacctcaggttcgagtcttgaccaatctggagaatttgaatgccgaa
gagaaagcaagggaagaggatcttcccatgcctgagctacagcacaacgtcaggttgatt
ctggacttagctgagctcgatatccagaagattgacagggacctgaggaatgagcgggac
acggccatcagcttgaaccaggagaaagagaggttggagacggaggtggccaggcagaag
caacacctggataacttggaggatattaggaccgtcatagatcgactgggagaagagaat
agcatgggaacattgacgctggactccctgacaaagggctttcgtgacctgcagaagaga
tacgccgatgactataagttatgtaacttgtcttgcattgcctgctccttcgctctgcct
ctgtttattaggatgtttcaaggctgggatcctcttaggaacccctcgcatgggttggat
gtaatatcttcttggaaggctttgcttcatggagagggggagagcgagcaatacctggat
atttgggatagctcaatgtccccttacaccaaattgctttccgaggtggtggtacccgcc
gtgaggattgctggcgtcaatacatggcagcccaaggaccctgaacccatgcttcgcttt
ctggagtcttgggagaacttgctgcctccttctgtccttcattccatactggatatggta
atctttcctaaattgaaggacgcagttgacttgtgggaacctcaccgggacactgttccc
atccatgtgtgggtgcatccgtggctaccactcttgggacacaagttggaagacttgtat
cacacaatacgattcaagttgagtaatgttctgggtgcttggcacccaagcgatggatct
gcctataccatactctcaccgtggaagaaggtgtttgatgccgcgagttgggaacaactt
atgtatagatttatagtacccaagttgcagcttgtcttacaagaattccaagtgaaccct
gcagatcagacacttgatcaatttaattgggtgatgagttgggcttctgctattccaatt
catctaatggtagatatattggagaaatttttcttcaccaagtggctacaggttttgtat
cactggttatgttcgaacccgaactttgaagaggttttaaattggtacaaaggttggaag
gaactcattcctgaggagcttcatgcaaatgaaagtatccggtatcagcttaattgtggt
cttgacatgatgaatcgggctgttgagggtatggaggtggtccaacctggtttgaaggag
aatattagctaccttagggtgcttgagcaaaggcaatttgaggcacagcagaaagcagca
gcagcagcacatgcaaacttgggtggcactgctcaaatggatggcattggtcacgagatg
agtttgaaagatgttattgaagcccatgcgcagcaaaatgggctgctatttaggcctaag
cctgggaggatgcataatggtcaccagatgtatggctttggtaatgtaagcataatagtt
gattccctaaatcaaaaggtatatgcccaaacagaggaaacttggtcccttgtatccctt
gaaaggttgctggacatgcacaataatttacttacaaggagacgctga
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